Takifugu rubripes (torafugu): 101079672
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Entry
101079672 CDS
T02386
Symbol
caprin1
Name
(RefSeq) caprin-1 isoform X2
KO
K18743
caprin-1
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101079672 (caprin1)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
101079672 (caprin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
101079672
NCBI-ProteinID:
XP_011605865
Ensembl:
ENSTRUG00000017061
LinkDB
All DBs
Position
9:13426139..13432664
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AA seq
682 aa
AA seq
DB search
MPSVMNANGTVLSVSPDVGSAPGSLGSFSTCGQSEVLKQVLIVIEKKARNMEKKKSKLDD
YQVRKNSGERLNHDQLEALSKYQEVMNNLEFARELHKTFLALGQDLQKVAKKSARREQLL
REEAEQRRLKNVLELQFILDRLGDDSVRQDLKQGVGGSPLLTDAELAAFDEFYKLVGPDR
EQNMRLTDKYEEASVHLWDLLEGRDKAVVGTTYKALKDTLDLVLLSGYFDRFPPHQNGCE
EEEDEEPVSAAAVALAESSEAEEQAVDPETELIKEFSEPITVEITEFVNRQFIPDGTYNN
GEKEQGEEWTAEMEAVAAMQQQPVQPAASPVTLENHPLNMASSVPAADPMARKQVVQDLM
AQMQGTYNFMQDSMLEFDGQAIDPAIVSAQPMKPTQNIDLPQMVCPLVHPESRLSQPNAV
PVQPEPTQVPIISPTPPPMYQNSHTPDPRPPTEPLDPIQTSMSLASEQPPPSSALPSSPQ
TQVFQPVSKAPHSSGINVNAAPFQSMQTVFNLNAPVPPASETEALNQANQYQNSYNQAFS
SQPQHPVEQSELQSEQLQSVGAFHSPDQSGGHQQPSQQGPGFNRQPQSFYTSRGMSRGGP
RNARGAINGYRGSSNGFRGSYDGYRPPFANTANSGYVQNQFNTPRDYPNGNYQRDGYQQN
YKRGTGQGPRGVSRGSTQAIRS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgtgatgaatgcaaatgggacagtcctatctgtcagcccagatgtgggatcc
gctccagggtcactgggaagtttttcaacctgtggacagtctgaagtcttgaagcaagtg
ttgattgttattgagaaaaaggcccgaaacatggagaagaaaaagagtaaattggatgat
tatcaagtcagaaagaatagcggagagcgtctaaatcatgatcagctggaagctctgtcc
aaatatcaggaagttatgaataacttggaatttgctcgagagttacacaaaacattcctg
gcactgggacaagatctccaaaaggttgcaaagaagtctgcacgacgggagcagctgctg
agagaagaggcggagcagaggaggctgaagaatgttctggaattacagttcattttggac
cggctcggtgatgactcggtgcgccaggatctgaaacagggggttggaggctccccactg
ctgacggatgcagagctcgcagcttttgacgagttctacaagttagtgggaccagaccgt
gaacaaaatatgaggttgactgataagtatgaagaagcatctgtccacctctgggacctg
ctggaagggagagacaaggccgtggttggaacaacatacaaggcattgaaagatactttg
gacttggttctgctgagtgggtacttcgaccggtttccacctcaccaaaatggatgtgag
gaagaagaggacgaagagccagtctcagcagcagcggtggcacttgctgagtcatcagaa
gcagaggagcaggctgtcgatccagaaactgaactaattaaagagttctcagaacccatc
acagtggaaattacagagttcgtaaacagacagttcattccagatggcacttacaacaat
ggcgagaaagaacagggagaggagtggactgcagagatggaggcagtcgctgccatgcag
cagcagccggtgcagcctgcagcatcgcccgttaccctggagaaccaccccctgaacatg
gcgtcttctgtacctgcggcagacccgatggccaggaagcaggtggtgcaggacttaatg
gcacaaatgcagggaacgtacaacttcatgcaggactcgatgttggagtttgacgggcag
gccattgaccctgccattgtctcggcgcaacctatgaaacccactcagaacatagactta
ccacagatggtgtgtcctctagttcacccagagtcacggctatcacaacccaacgctgtc
ccagttcaaccagagcccacacaagttcctatcatctcccccaccccaccacccatgtac
cagaactcacacacaccagacccccggccgccaacggaacctctcgatcccatccagacc
tccatgtccttggcttcagagcagcctccaccctcctcagccctcccgtcttcacctcaa
acacaagttttccagcctgtttccaaagctcctcacagcagtggcatcaatgtcaacgct
gctccattccagtcgatgcagacggtgttcaaccttaatgcccccgtccccccagcaagt
gagacagaggctttgaatcaggctaatcagtaccagaacagttacaatcaggctttcagc
agccagccacagcatcctgtggagcagtcagagctgcagtcggagcaactgcagtccgtt
ggtgccttccattccccagaccagtctggaggtcatcaacagccttcacagcagggccct
ggtttcaacaggcagccacagtccttctacaccagtcggggcatgtcccgtgggggccct
cggaatgctcggggggcaataaacggttatagaggctcatctaatggattcagaggtagt
tatgatggttatcgtcccccttttgccaacactgcaaactctggatacgtacagaatcag
ttcaacacacctcgtgattaccccaacgggaattatcaaagggatggttaccaacagaac
tataagcgtggaactggtcaaggacctagaggagtgtcaagaggcagcactcaggcgata
cgatcctga
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