Takifugu rubripes (torafugu): 101080200
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Entry
101080200 CDS
T02386
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101080200 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101080200 (sox17)
Transcription factors [BR:
tru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101080200 (sox17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
101080200
NCBI-ProteinID:
XP_003968128
Ensembl:
ENSTRUG00000007618
UniProt:
Q6WNS5
LinkDB
All DBs
Position
10:8417840..8419874
Genome browser
AA seq
399 aa
AA seq
DB search
MSSPDAGYASDDQTQARCTMSVMMPGMGHCQWVDPLSPLGDTKVKSEPCASGSGSQNRGK
SEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVTEKQPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRIKRLDSGFLVHGAADHQGQPLAGEGRVCMESLGLGY
HEHGFQIHSQPLSHYRDAQALGGPSYETYSLPTPDTSPLDAVESDSMFFQPHSQEDCHMM
PAYPYHPQAAEYQPQDPLSNHHSNPILHRHPASAPEQPPQPSTLPPAYMGCPNPLALYYT
HCSPGHTKRHPGGPGQLSPPPDSHPHSTDSVEQMHQAELLSEVDRSEFEQYLSSSSGRGD
MAGLAYGAHEAAMQGPESLISSVLSDASTAVYYCSYNNS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcccgatgcgggttacgccagcgacgatcagacccaggcaaggtgtacgatg
tcagtcatgatgcctggaatgggacactgccagtgggtcgaccctctcagtcctctcggg
gacaccaaagtcaagagcgaaccgtgcgcctccggctccgggagccagaatcgcggaaag
agcgagccgcgcatccgacggcccatgaacgcgttcatggtgtgggcgaaagatgagcgc
aagaggctggcgcagcagaacccggacctgcacaacgccgagctgagcaaaatgctgggg
aaatcgtggaaagcccttcctgtcacagaaaagcagccgtttgtggaggaggccgagcga
ctcagggttcagcacatgcaggatcaccccaactacaagtatcgtccccggcggcggaag
caggtgaagaggattaagaggctggattcggggttcctggtccacggcgcggccgaccac
cagggccagccccttgccggcgagggcagagtctgcatggagagtctgggcctcggctac
cacgaacacggcttccagatccactctcagccgttgagccactaccgggatgctcaggca
ctcgggggcccctcgtacgagacgtacagcctgccgacgcctgacacctctcctctggat
gctgtggagtcagactccatgttcttccagccacattctcaggaggactgccacatgatg
cctgcttatccctaccacccccaggcagccgagtatcagccccaggaccccctctccaac
caccacagcaaccccatcctgcaccgacacccagcctcggctccagagcagccccctcag
ccctccacactcccccctgcctacatgggatgccccaaccccctagctttgtattacacc
cactgcagccccggccacaccaaacgccacccgggcggcccaggtcagctctcgccgccc
cctgactcccacccgcactcgacggacagcgtggagcagatgcaccaggccgagctgctg
tccgaggtggaccgcagcgagttcgagcagtacctgagctcttcgtcggggcgcggcgac
atggcggggctggcgtacggcgcacacgaagccgctatgcagggacccgagagcctgata
tcatcggtgctgtcggacgccagcacggccgtgtactactgcagctacaacaactcctaa
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