Takifugu rubripes (torafugu): 105416671
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Entry
105416671 CDS
T02386
Symbol
limd1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
105416671 (limd1)
03036 Chromosome and associated proteins [BR:
tru03036
]
105416671 (limd1)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105416671 (limd1)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
105416671 (limd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
105416671
NCBI-ProteinID:
XP_011603816
Ensembl:
ENSTRUG00000025656
LinkDB
All DBs
Position
7:complement(11757521..11770175)
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AA seq
603 aa
AA seq
DB search
MDKYEDLGLEASKFIEDLNMYEASRDGLFRTRRDVGNNPDFEETRKVFASKMTKIHMQKH
QEEMARNSPAMKMNGGHASGYHTKDRPPINSNRQAGEAAAKPPMLSGPAPGTAAANQCAP
FDGQKHHTGAQPELPTGRAYGYGNNYDNTESLEPHAYQRATHTPPSPGNASPSAPTHARH
PISQSAVWAPSTESQISTAGSGSSAASQLPRQPTPPSSISVPPQHFQTGTSSGNWTSPSS
SRGLLRESKPDLIPSLPLSAFIGGDDLHMQQPTTQASAYYDPQSPRPSSSRNGSAPVSPV
PPSPHETPQLKAQEASSASAPGSIARSSSQIQSKSPVPGNVRGFEADVPCSPKSAQLVSQ
SLLTQPQEQGSSAAEMKLEAIAKRLEKEMDAQAKGDFFGTCVKCNKEVYGANQACQAMGN
LYHDNCFTCSACSRRLRGKAFYYVGGKVFCEEDFLYSGFQQSADKCNACGHLIMDMILQA
LGKSYHPGCFRCVICNESLDGVPFTVDTENKIYCLKDYHRVLAPKCSACNQPILPSEGSD
ETIRVVSMDKDYHVECYRCEECKIELNDEEGHRCYPLNGHLLCHSCHLKNIQGCAPSITA
SSY
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgaggacctgggactggaggcgagcaagtttatcgaggacttgaacatg
tacgaagcatcgagagatggtttgtttcgcacgagaagagatgtaggaaacaacccagat
tttgaagagaccaggaaagtttttgcctccaaaatgactaaaatccacatgcagaaacac
caagaggaaatggcaagaaacagcccggcgatgaaaatgaatggtggccacgccagtggg
tatcacaccaaggacagaccgcctattaatagcaacagacaagcgggtgaagcggcggca
aagcccccgatgctctctggccctgcgccgggcaccgcggccgcgaatcagtgcgctccg
tttgacggccagaaacaccacacgggcgcgcagcctgaactcccaaccggaagggcatat
ggctacggaaacaattatgataatacggagagtttagagccacatgcataccagcgcgcc
acccatactccccccagcccaggaaacgcgtctcccagcgcgcccacacatgctcgtcac
cccatcagccagtctgcggtttgggccccatccactgagagccagatttccactgctggc
tctgggagcagtgctgcatctcagctgccccgccagccgacaccacccagtagcatcagc
gtcccgccccagcactttcagacaggcacctcatcaggaaactggacttcaccttcttct
tccaggggattgttaagggagtccaaaccagacctcatcccatccttgcctttaagtgcc
ttcatcggaggagatgacttgcacatgcagcagcccaccacgcaggcctcagcctattac
gacccacaatccccaagaccctcctcctcccgtaatggttccgcaccagtttccccagtt
ccaccttctccccacgaaacgcctcaactcaaagcacaggaggcttcttcggcatcagca
ccaggcagcattgccaggagcagcagccagattcagtccaagagcccagtgcctggcaat
gtccgtggctttgaggcagatgtcccgtgctccccaaagtctgcccagctggtttctcag
tctctcctcactcagccgcaagagcagggatcctcagcggctgaaatgaaattagaggcc
atcgctaaacggctggaaaaagagatggatgctcaagcgaagggtgacttctttggaacc
tgcgttaagtgcaacaaggaggtctacggagccaaccaggcctgccaggcaatggggaac
ctttaccatgacaactgcttcacctgcagcgcctgcagtcgacggctgagaggaaaggcg
ttttactacgtgggtgggaaggttttctgcgaagaggactttctgtactctggtttccag
cagtctgcagacaagtgcaatgcctgtggacacctgatcatggacatgatcctacaagcc
ctggggaagtcctaccacccaggctgtttccgctgcgtcatctgtaacgagagccttgat
ggagtgcccttcaccgtggacacggaaaataagatctactgcctcaaagattaccacagg
gtcctcgcaccaaaatgctcagcctgcaaccagcccatcctgccatcagagggctcggat
gagacaatccgagttgtgtccatggataaagactatcacgtggaatgctaccgctgcgag
gaatgcaagatagagctgaatgacgaggagggccaccgctgctaccctctgaacggccac
cttctctgccactcctgccacctcaagaacatccagggctgcgccccctccatcaccgcc
tcctcctattaa
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integrated database retrieval system
