Takifugu rubripes (torafugu): 105416789
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Entry
105416789 CDS
T02386
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
tru
Takifugu rubripes (torafugu)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
105416789
NCBI-ProteinID:
XP_011604667
Ensembl:
ENSTRUG00000012571
UniProt:
H2U4G1
LinkDB
All DBs
Position
8:8035018..8043563
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AA seq
741 aa
AA seq
DB search
MVAVTLGSFIAVFHLCLVQLGHGGAYFGRNQPPQPLPQYNDGFPQQPFKGNEMPRVMHGK
NVPLLPQYGKEHPQLPLQMGKEGMSVHGKGQTFPRGAKGPPPLGPVGEVLIEGPQGFQGP
PGPPGHPGPPGPQGPPGLPGQMMTGSPGKPGLPGPQGYPGIGKPGMPGYPGKPGGPGLPG
PKGELGPSGGEGPAGLMGPPGAPGPPGLPGISKSGTIGLPGQPGLRGEPGQKGSPGSHGV
PGPKGDKGLGLTGLPGLEGLRGPTGPPGNVGLPGVGKPGRNGLPGQPGIPGKPGSSGEPG
LAGPPGERGQPGAGGLPGLGKPGKDGLRGQPGLSGGKGEPGPHGLPGSPGIPGYGKPGFP
GSKGHKGHPGLPGLPGTKGDKGHAGLTGVIGLTGQSGMPGLPGTIGPPGGLGFPGPKGED
GDIGSKGYPGQKGELGPTGLPGKPGLSGVDGQPGPRGFQGPIGPKGEHGARGLPGAPGGG
GSTGLRGEVGKPGERGDQGPQGIPGLPGPGGPIGPPGMPGQKGETGFPGRPGYPGEGKPG
LPGHVGPQGSQGQTGPTGLPGPPGLPGPPGPPGFPATSPDRRQILPASGPNGGQKQVYMK
NGGNIGENGPETPAFTAKLTTPFPPAGSPIIFDKLLYNGNQDYNPQTGVFTCSIPGIYYF
AYHVHCKGGNVWVALMKNNEAVMYTYDEYKKGLLDQASGSAILPLRRSDTVHIQLPSDQA
SGLYAGQYMHSTFSGYLLYVM
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgtaacccttggttccttcatcgcagtgttccacctgtgtttggttcagctt
ggtcacggtggggcatattttgggcgcaaccagccccctcagcccctaccgcagtacaac
gatggttttccccaacaaccgttcaaagggaacgagatgccacgcgtgatgcatggcaaa
aatgtccctctgttgcctcaatatggtaaagaacatccccaactacctttgcaaatgggc
aaagaggggatgtcagttcatggaaaaggacagacttttcccagaggggctaagggtcca
cctcctcttggtcctgttggagaagttcttattgagggtccacaaggattccagggacct
ccaggaccaccagggcatccaggaccccctggaccacagggaccacccgggctaccgggc
caaatgatgacaggatcaccaggaaagcctgggctaccaggtcctcaagggtacccagga
attggaaaacccggcatgccgggatatccaggaaaacctggtggacctggtttaccagga
ccaaaaggtgaacttggccctagtggcggtgaaggaccagctggtcttatggggcctcct
ggggctccaggcccccctggactcccagggatttcaaaatcaggaactattgggcttcct
gggcagcctggcctcagaggagagcctggtcaaaagggttcacctggatcccatggtgtt
ccagggcctaaaggggacaaaggccttggtttaactggtttgccaggtttagagggcctc
agaggcccaactggtccaccaggaaatgtgggccttcctggggttggtaaacctggccga
aatggacttccgggacaaccaggaatacctggaaaacctggttcatctggagaaccaggg
ttagctggaccccctggggaaaggggccaaccaggagccggaggcttgccaggacttgga
aaaccaggaaaagatggtttaagaggacaaccagggttgtctggcgggaaaggtgaacca
ggccctcatggtttacctgggagtccaggaattccaggatatggtaaaccaggtttccca
ggttctaaaggtcacaaagggcatcctggtctccctggacttccaggaacaaagggagat
aaaggtcatgcaggtcttaccggtgtcattggcctcactggacaaagtggtatgcctgga
ctaccaggtacaatagggccgcctggtggtcttggtttcccagggccaaagggagaagat
ggtgatattggatcaaaaggatatccaggacagaagggtgagttaggtcctacaggtctt
ccaggaaaaccaggcttatcaggagtggatgggcaaccaggaccaaggggttttcagggg
ccgattggccccaaaggtgaacatggtgctcggggtctaccaggtgcccctggtggtgga
ggatcaactggtctacgaggagaggtggggaaaccaggagagagaggtgaccaagggcca
caaggtataccaggacttccaggacctgggggaccaattgggcctcctgggatgcctggg
caaaaaggcgaaactggctttcctggtagacctggctaccctggagagggaaaaccagga
ctccctggccatgtgggccctcaaggtagccaggggcaaaccggtcccaccggacttcca
gggccaccgggacttccaggaccaccagggcctccaggttttcctgctacatctcccgat
cgcagacaaattcttccagcgtctggcccaaacggcggccagaagcaagtctacatgaag
aatggagggaacattggtgaaaatggcccagagacgcctgcattcacagctaaactcaca
acgccattcccacctgctggctcaccaataatctttgacaaactactttacaacggcaac
caggactacaatccccaaactggtgttttcacctgcagcataccgggaatctattacttt
gcgtaccatgtccactgcaaaggaggtaacgtgtgggtggctctgatgaagaacaatgag
gcggtcatgtacacatacgatgaatacaaaaagggtttgctggaccaggcgtcaggcagc
gccatcctgcccttaaggcgcagtgacaccgttcacatccagctgccatctgaccaggct
tcgggactttacgccggtcaatacatgcactccacattttctggatacttactgtatgta
atgtag
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