Takifugu rubripes (torafugu): 105417073
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Entry
105417073 CDS
T02386
Symbol
phf11
Name
(RefSeq) PHD finger protein 11 isoform X1
KO
K23310
PHD finger protein 6
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105417073 (phf11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
105417073 (phf11)
03009 Ribosome biogenesis [BR:
tru03009
]
105417073 (phf11)
03036 Chromosome and associated proteins [BR:
tru03036
]
105417073 (phf11)
Transcription factors [BR:
tru03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
105417073 (phf11)
Ribosome biogenesis [BR:
tru03009
]
Eukaryotic type
Other ribosome biogenesis factors
105417073 (phf11)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
105417073 (phf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
HTH_Tnp_Tc5
zf-HC5HC2H_2
CENP-B_N
HTH_23
PHD_NSD
Syntaxin-5_N
Phage_HK97_TLTM
Motif
Other DBs
NCBI-GeneID:
105417073
NCBI-ProteinID:
XP_011606825
Ensembl:
ENSTRUG00000024682
LinkDB
All DBs
Position
1:complement(16552301..16557404)
Genome browser
AA seq
578 aa
AA seq
DB search
MDPRKVVEKSEKEEKKKRRAFLSIQTKQEIIEKHERGMRLVDLAKEYGRNASTICSVLKQ
KEVLKAVTPSKGLSVISKRRSAVNDKMERLLLVWIKEKEIAGDIMTGAIICKKATAIYNN
LVTEGAAQGTSVQERTQEFKASRGWFEKFRRRTGIYSVLRRGELFASGLCCENSPEFDDL
FGFSVKDVLEEVKRGKKLMCCKCKKKGATAGCEVRRCKRSYHYPCAVENGAKTIEETERG
RYILYCPQHHLKTTGNGTSTNGSSPIASDQSPCQAGPSKKRTVGSPNHPEPSSKRLFLNS
ENCKALANALEDSSDSERWDLFVDLSIFAPLETDIDEDEEPQQPEARNAMEDLKGSAGAF
HQTLGGDGWMQSQSGNGSFSSPAARLRRISSSDETPPEPGRLSLDPAMATNVGTQTSVTK
ATTMVVKVNVHSKEEPSPVYLPASPTAVASAPLPSHAEVPGVSTSSPHPVSSPPVASVSS
CTALEPSIDSASFWRSCNEAGCTKAIFSGFFQEMSDMADRIQQDRASQEDYDLALLVMEA
SGKLEHLVNKQNEEIQRKQMEVCKVVAAMKQILSTLKR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaggaaagtggtggagaaaagtgaaaaagaagaaaagaagaaaaggagagct
tttttgtccatacaaacgaagcaagaaatcatagaaaagcatgaaagggggatgcgtttg
gttgatctcgccaaagaatatggccgtaatgcatcgacgatctgctcggtactaaaacaa
aaggaagtcctaaaagctgtgactccttccaaaggactctctgtgatttcgaagaggagg
tcggcagtgaatgataagatggaaaggttgttactcgtgtggataaaggagaaagagatc
gctggtgacataatgaccggggctatcatttgcaaaaaggcaaccgccatctataataac
ctggtgacggagggtgcagctcagggaacctcggtgcaagaacgaacccaggagttcaaa
gcatcgcgggggtggttcgagaagttcaggaggaggactggaatttactctgttcttcgc
cgtggtgagctgtttgcttccggcctttgctgtgaaaatagtccagagtttgacgacctg
tttggcttctcggtgaaggacgtgttggaggaggtgaaacgtgggaaaaagctgatgtgc
tgcaaatgcaagaaaaaaggcgccacggcaggatgcgaagtaagacgctgcaagaggtcc
taccactacccctgtgctgtggagaacggagccaagacgattgaagagacagaacgagga
agatatatactttattgtccccagcaccatttaaagactacaggaaacggcacctccacc
aatggttcctctcccattgcttcagaccaaagtccctgtcaagcaggaccttccaagaaa
cggacggtcggctctcccaatcacccagaaccttcatccaaacgcctgtttttaaactct
gagaactgtaaggctttggcaaacgcactggaggattcttcagattcagaacgctgggat
ttgtttgtagatctgtcaatatttgcccctttggaaactgatatagatgaagatgaagag
ccccagcagccagaagcaagaaacgccatggaggatctcaaaggttctgcaggtgcattc
catcagactctgggtggagatggatggatgcagagccagagtggaaacggttccttctcg
tctccggcagcacgtctccgtaggatatcgagctccgatgaaacgccaccggaacccggc
cggttgagcttagaccccgccatggcaacaaatgtggggacacaaaccagtgtaaccaag
gcgacaacgatggtggtcaaagttaatgtgcacagcaaggaggagcccagccccgtctac
cttcctgcgtcacccaccgctgtggcgtccgcgcctctgcccagccacgccgaagttccc
ggtgtttctacctcgtccccgcaccccgtctcgtctccacctgtcgcctccgtctcctcc
tgcacggctctagagcccagcatcgactctgccagcttctggagaagctgtaatgaagca
ggctgcaccaaagccatcttctctgggttctttcaggagatgagcgacatggccgacagg
attcagcaggaccgggccagccaggaggattatgaccttgctctgttggtgatggaggct
tctgggaaactggagcatcttgtgaacaagcagaatgaagagatacaaaggaaacagatg
gaggtttgtaaagttgttgcagctatgaagcagatcctctcaacacttaagagatga
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