Takifugu rubripes (torafugu): 105417167
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Entry
105417167 CDS
T02386
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105417167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
105417167
03021 Transcription machinery [BR:
tru03021
]
105417167
03036 Chromosome and associated proteins [BR:
tru03036
]
105417167
Transcription factors [BR:
tru03000
]
Eukaryotic type
Helix-turn-helix
ARID
105417167
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105417167
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105417167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
105417167
NCBI-ProteinID:
XP_029701201
LinkDB
All DBs
Position
12:complement(6718874..6751782)
Genome browser
AA seq
2285 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDSQEESVPGEKQHENKEPGPDGGSPGQKELQDGTDA
GNAGGGGDPDMKNGNGNLSRVNNNSSIQNDSGGPEGNNHPGMGHHHPGPFPPPPYGYNQH
YNRAPFHQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYPNHYNNYSPYPNRTSYQGQGYG
AMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRFNMGTQQPTSTPTLNQLLTSPSS
ARSYPNYPQGDYNNQEGANKGAGDMGSSQYGGVHPGWQQRTHHPPPMSPGNTGQPPNRNQ
PPSPMDQVGKMRGQPYGGPNPYSQQQQGPPAGPGPQQGGSYPGQGYGPPGPQRYPMGMQS
RTPGGMGSMQYGQQMSAYGQQGPGGYGQQSQAYYGQHGPPPLPGQQQQQQPSYPGQPQGS
SGTPYSQPGHPSQPPGQHGQSGSPYQQSQGPHGPAPGQPPYSQPPHSQQGQPPYVPPQQQ
QQQPQQQQQGPGPQSQQGPQGQSGYPQPPGPGQPPQQPPPPQQQQGPPQPQQQQQQQQPQ
QQPGGPTPQAQPPPGHGQQGQPSPYSQTPPLPQQQQQSPYQRFPPPPQELSQDSFSSQSN
ASASNQAMASSKSSQEDSMQTRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQ
SNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVTPSRTGPLSPAAVPGNQMPPRPPSVQS
DSIMHSSMNQSAMGQDRVYMRNPQMPPYGSPGHPGQPGSALSPRQSSGGQMHSGMGPYPQ
NNSMGNYGPQSGQYGPQGYPRQPGYTGMPNANYPSGPGMGGTMNPMPSQGSGGPYGSIPP
GRLGPGQMGARPYGPGMGTNMGGMHPQVGSGMCPPPGMNRKDGGPSMHHGPTNSIHNRPP
GYPNMSQGMMGAGSPYGPGMNSMHGMMNQGGPGPYPMGTNMANNTPGMPPNSEFGMEKMN
PAQKINNKVEGTPKTESKKKSSSSTITSEKITRLYDLGQEPERKMWVDQYLAFAEEKAMG
MSNLPAVGRKPLDLFRLYVSVKQIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYI
QCLYAFECKIERGEDPPPDFFNTDTKKSQPKIQPPSPAGSGSLQGPQTPQSTSSSMAEGG
DLKPPTPASTPHTQMPPMPGARSSVNLQDPFADGGDPAFSRRNAMTPNSQGYQPSMGGPE
MMGRMGPYESNKDPFGGMRKAGEQFMQPGPNSGMGEQYNRGPPGPMANMQMGQRQQYPYG
YDRRQESGMGPDGSMGPGAPQPNMMPSGADTGMYSPSRPPPQQRHDSYSNQFPGQGAPPG
GPYPNQQPGMYPQQQPNYKRPVDGGYGPPAKRHEGEMYNVPYSGQQQPGPQSSGPQGQQD
MYNQYNAYPGGDRRPPGPQNQFPFPFGRERGPSSGGPNSQSPMPPQMMASSMPSGPDGPQ
GPMWQSRNEMGYPNYPNRQGPPVPGQGPGYHGMNRSEEMMSSDQRMNHEGQWPSHVNQRQ
PPFGPGGSGPPMTRPLPSTYQTSQNHIPQVSSPAPMPRPMESRTSPSKSPYMHPGIKVQK
AGPPVPASHIGQAPVQQPMIRRDVAFPPGSVEASQPHLKPRRRLTMKDIGTPEAWRVMMS
LKSGLLAESTWALDTINILLYDDNSISTFNLCQLPGFLELVVEYFRRCLIEIFGILKEYE
VGDPGQRTLIDPNAAEDSDNDLPLPEGDGMDLVEDDEEDEEVEESKANADASLVRVKQEE
ESSQKHKCSEDEEEDSERESLIKEPNTSTSGSSQDPGLHSERPRQASKFDKLPLKVVRKK
NPFLVNHSSKLGQRQNFDSGLIHWSIGGGDTTDHIQTHFESRADHLKQRKRKPAATESRK
KAQVTEAVTENSEKSNSGLEEKPQRQPQSSGPQKSPSEKAPPPLIATIDDVLSARPGSIT
EEAVRGGAEEQKENGKYLFSINPELQSRRNVKILEDEPHSKDETPLSTLSDWQDSLARRC
ICVSNIVRSLSFVPGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEEEEDEGV
SCERDEWWWDCLEVLRENCLVTLANISGQLDLSIYSESICLPLLDGLLHWAVCPSAEALD
PFPTLGPHGSLSPHRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGSLVRLVGERKVA
VCREMAVVLLANLAQGDSLAARAIAVQKGSVGNLLGFLEDSLAATQYQQSQSSLLQMQGG
PQFEPTSVDMMRRAARALHALAKVEENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF
LIGQS
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaagtcgctagcgtcgccactctcaacactagcccgccatccgaactcaaa
aagccggaccgggactcgcaggaggagtcggtaccgggagagaaacagcatgaaaataag
gaaccgggacctgacggcggatctccgggccagaaagagctgcaggacgggaccgatgct
ggaaatgctgggggaggaggggatcctgatatgaagaacggcaacgggaatttgtccagg
gtaaataataatagcagtattcagaatgattcaggcgggcccgaagggaataaccatccc
ggtatgggacaccaccacccgggcccctttcctccacctccttacggttacaaccagcac
tacaaccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttacccccctaattcacacgaacacggctaccccaac
cattacaacaactacagcccgtacccgaacaggacttcttaccagggccaaggttacggg
gccatgaattccccgcgtaacaaccagcctccggcggctggggggcagccaggcaagcaa
cagccagcaggaggaaccacggctatggctgcctcttacaataatcagaggtttaatatg
ggaacccaacaacctacgtctacgccaactttgaatcagcttttgacatcacccagctct
gccaggagctacccgaattacccccaaggagactataacaatcaggaaggggccaataag
ggagcaggagacatgggcagcagtcagtatggtggggtccatccgggttggcaacaaagg
acccaccatccgcctcctatgagcccgggaaacactggacagcctcccaacagaaaccag
cctccgagcccaatggaccaggtagggaagatgcgcgggcagccgtacggaggacccaac
ccttattcccagcagcagcaggggcctcccgcagggcccggaccccagcagggaggctcc
taccctggtcaaggctacggtcctccaggtcctcagaggtatccaatggggatgcagagt
cggacccctgggggtatgggcagcatgcagtacggacagcagatgtcagcctacggacag
caaggcccaggaggctacggccagcagagtcaagcctactacggtcagcacggcccccct
cccctccccggtcagcagcagcagcagcagccgtcgtaccctggccagccccagggcagt
tctggaactccctactcccagccgggccatccttcacagccaccgggacaacacggacag
tcaggatccccttaccaacagtcccaaggcccccacggccccgctccaggtcagcctcct
tatagccagcccccacattcccagcaaggacagcctccctacgtccctccccagcagcag
caacagcagcctcagcagcagcagcaagggccgggtcctcaaagtcagcagggtcctcaa
ggtcagtccggttacccgcagcctccaggaccggggcagccgccgcagcagcccccacct
ccgcagcagcagcagggccccccacagccacagcagcagcagcagcagcagcagccccaa
cagcagccaggcggtccaactccacaagcccagccacctcccggtcatggccagcagggt
caaccctcaccatactcccagacaccccccctaccccagcagcagcaacagtcaccctat
cagaggttcccccctcctccacaggaactttcccaggattcctttagctcccagtccaac
gcttctgcttccaaccaggccatggcctccagcaagagcagtcaggaagacagcatgcag
acccgaccgtccagcctgccggacctgtcggggtctattgatgacctgcccactggtaca
gaaggggccctgagccccggcgtcagcacatccggagtttccagcagtcagggcgagcag
agcaaccctgcccagtcgcccttctctccacacacttctcctcacctgccaggtatccgt
gggccctcgccatcacccgtgggttctccggccagtgtcaccccgtcacgcaccggcccg
ctgtcccccgctgctgtaccaggtaaccaaatgcctcctcggccacccagcgtccagtct
gacagcatcatgcactcttccatgaaccagtcagccatgggccaagacagggtatacatg
cgtaaccctcagatgcccccttacgggtctcctggtcaccctggacaacctggttctgcc
ttatctccacgccagtcttctggaggccagatgcatagtggaatgggaccgtatccccag
aacaactccatgggaaactatggtcctcagagcgggcagtacggcccacaaggttacccc
aggcagcctggctacacaggaatgcccaatgccaactaccccagtggccctgggatgggc
gggaccatgaacccaatgcccagtcagggcagtggggggccatatgggagcatcccacct
ggcagactgggcccagggcagatgggtgctcggccctacggccccgggatgggcacaaac
atgggtggcatgcatcctcaggtgggctccggcatgtgtcctcctccgggcatgaacagg
aaggacgggggcccctcgatgcaccatggacccacaaactccatacacaacaggccacct
ggctaccctaacatgtcccagggcatgatgggagcaggctccccttacggccctggcatg
aacagcatgcacggaatgatgaaccaggggggcccaggaccgtacccgatgggcacaaat
atggccaacaacacccctgggatgcctccaaattcagagtttgggatggaaaaaatgaac
cctgcccagaagataaacaacaaggtcgaaggcacgcccaagactgaatccaaaaagaag
tcgagctcctccaccatcaccagtgagaagatcacccgtctgtacgatctgggccaagag
cccgagcggaagatgtgggtggatcagtacctggcgtttgctgaggagaaggccatgggc
atgagcaacctgccggccgtgggacgcaaacctctggatctcttcagactctacgtgtct
gtcaaacagatcgggggtctcacacaggtcaacaagaacaaaaagtggagggagctggcc
accaacctgaacgtgggcacatcgagcagcgcagccagctcgctcaagaagcagtatatc
cagtgtttgtacgccttcgagtgcaagatcgagcgtggcgaggacccgcccccggacttc
ttcaacacggacaccaaaaagagtcagccgaagatccagcctcccagcccagctggttct
ggatccctccaaggaccccagactcctcagtccaccagtagttcaatggcagagggggga
gacctgaagccccccaccccggcctccacaccacacacacaaatgcctccgatgcctggc
gccaggagtagcgttaatctacaggatccatttgctgatggcggcgatccagcgttttca
agaaggaacgccatgactcccaactctcagggctaccagccaagcatgggtggcccagag
atgatgggccggatgggtccgtacgagtccaacaaggaccccttcggtggcatgaggaaa
gctggagaacagttcatgcagccagggcccaacagtgggatgggagaacaatacaacaga
ggcccgcccgggccgatggctaacatgcagatgggtcagaggcaacagtatccgtatgga
tatgaccgaaggcaggagtcggggatgggccctgacggcagtatgggaccaggggctcct
cagccaaacatgatgccttctggagctgacacagggatgtactcacccagccgccctccg
ccacagcaacggcatgactcctatagcaatcagttccctggacaaggagctccccctggt
ggcccgtatccaaaccaacaaccaggaatgtatcctcagcagcaaccgaactacaagcga
cctgtggatggagggtacggacctccggcgaagcgtcacgagggtgaaatgtacaatgtg
ccctacagtggtcagcagcagccaggacctcagtcttcggggcctcagggccaacaggac
atgtataaccagtacaatgcataccctggtggggaccgcagaccaccgggcccacagaat
cagttccccttcccctttggtcgtgagcgaggaccatcgtccggaggccccaactctcag
tctccaatgcctccccaaatgatggcgagctccatgccttcaggtcccgatgggcctcaa
ggcccaatgtggcagagccgcaatgaaatgggctaccccaactatccgaaccgacagggg
cctcctgtaccgggccagggccctgggtaccacggcatgaaccgctcagaggagatgatg
tcctcagaccaacgcatgaaccatgaaggtcagtggcccagccacgtcaaccagcgacag
ccaccgttcggccctggtgggtccggacctcccatgacccgacccctgccatccacctac
cagacctcccagaaccacattcctcaggtgtccagcccagcacccatgccccggccaatg
gaaagcaggacgtcgcccagcaagtccccctacatgcacccggggatcaaagtgcagaaa
gctggacccccagtaccggcctcccacatcggccaggcgcccgtgcagcagcccatgatc
cgacgagatgtggccttccctcctggctccgtggaggcctcacaacctcacctcaagccc
cgccggcggctcaccatgaaagacatcggaactccagaggcctggagagtgatgatgtcc
ctgaagtcgggcttgctggctgaaagcacctgggccttggacaccatcaacattttactg
tacgacgacaatagcatttctactttcaacctgtgccagctacctggattcctggagctg
gtggtggagtacttcagacgctgcctcatagagatatttggcatcttgaaggagtatgaa
gtgggagatcctggacagcgtaccctcatagaccccaatgctgctgaggactctgacaat
gaccttcccctgccagagggcgatgggatggacttggtggaggacgacgaagaggacgag
gaggtggaggaatcaaaggccaatgctgacgcctcactggtccgcgtgaagcaggaagag
gagagttcgcagaaacacaagtgttcagaggacgaggaagaggacagcgaaagggagtct
ttgataaaggaacctaacacctctacctcagggtcgtcccaagaccccggcctccattca
gagaggccccgacaggctagtaaatttgataaactacccctcaaggtagtgaggaagaag
aatcccttcctggtgaaccactcgtccaagcttggccagaggcagaactttgacagcggc
ctgatacactggagcatcggtggcggcgacactaccgaccacatccagacccacttcgag
agccgggcggaccatctcaagcagcgaaaacgcaaacctgctgccacggagagtcgcaag
aaggcccaggtgacggaggccgtgacggaaaactcggagaaatccaactccggcctggag
gagaagcctcagcgacagcctcaatcctccggacctcagaagtctccctcagagaaggcc
cctcctcctctcatcgccaccatcgacgacgtcctgtccgcccgcccggggtcgatcaca
gaggaagcggtccgcggcggtgccgaggaacagaaggagaacggcaagtacctgttcagc
atcaacccagagctccagagcagacgcaacgtcaagatcctggaagacgagcctcacagc
aaggacgagacgccgctgagcacgctatcggactggcaggactcgctggcccgccgctgc
atctgcgtctccaacatcgtgcgcagcctctccttcgtccccggcaacgacctggagatg
tccaaacaccccgggctgctgctgctgctgggccgcctggtcctgctccaccacaggcac
cccgaacgcaagcaggcaccggtcacctacgagaaggaggaggaggaagacgaaggcgtg
agctgcgaaagagacgagtggtggtgggactgcctggaggtgctgcgggagaactgcctg
gtcacgctggccaacatctcgggccagctggacctctccatctactcggagagcatatgc
ctgccgctgctggacggcctcctccactgggccgtgtgcccctcggcggaggccttggac
cccttccccactctggggccgcacggctcgctctccccccacagactggtcctggagacc
ctcagcaagctcagcatccaggacaacaacgttgacctcattctggccacgccgccgttc
agccgcctggagaagctgtacggctcgctggtgcgcctggtcggcgagcgcaaggtggcc
gtttgccgggaaatggcggtcgtgctgctggctaacctggcgcagggcgacagcctggcc
gcacgggcgatcgccgtgcagaaaggcagcgtgggcaacctgctgggcttcttagaggac
agcctagcggctacgcagtaccagcagagccagagctccctgctacagatgcagggcggg
cctcagttcgagcccaccagcgtggacatgatgcggcgtgcggcgcgggctctgcacgcc
ctggcgaaggtggaggagaaccactcggagttcacgttgtacgagtcgcggctactggac
atctccgtgtccccactaatgaactctctggtgtcccaggtgatctgtgacgtactgttt
ctgatcggccagtcatga
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integrated database retrieval system
