Takifugu rubripes (torafugu): 105417218
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Entry
105417218 CDS
T02386
Symbol
dync1i1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04145
Phagosome
tru04814
Motor proteins
tru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105417218 (dync1i1)
09142 Cell motility
04814 Motor proteins
105417218 (dync1i1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105417218 (dync1i1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tru03036
]
105417218 (dync1i1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tru04812
]
105417218 (dync1i1)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
105417218 (dync1i1)
Cytoskeleton proteins [BR:
tru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
105417218 (dync1i1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Dynein_IC2
Beta-prop_EML
WD40
WDR55
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Mu-transpos_C_2
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
105417218
NCBI-ProteinID:
XP_029700584
Ensembl:
ENSTRUG00000020585
LinkDB
All DBs
Position
12:complement(10893893..10920662)
Genome browser
AA seq
652 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEVRKNSDNQKKRETTPEDSDLDRKR
RETEALLQSIGISPEPSLVPTPVSPSKSVSTPSETGSQDSADGGAASRFRSGFSQYQSHA
QISRTLQWDTDPSVLQLQADSELGRRMQRLGASKITQVDFLPREMVSYSKETQTPLNAHL
SEVEEEEEDEEMAQVKPGLESEQQDDEDSRETKEGCFGALRELTEEERQQILHSSEFQSF
LDCSIRVVERALAEDGDIFFDYGGRDLEDKEGDLGSGSRLALCRLFYDEHWSKHRVITCL
DWSPQYPELLVASYNNNEDAPHEPDGVALVWNIKFKKATPEYIFHCQSPVVSVGFARFHP
NLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDG
RMCSWSLDMLSQPQETMELVYNKSKPVAVTCMAFPTGDVNNYVVGSEEGTVYTASRHGSK
AGICEMFEGHQGPVTGISCHGAVGTVDFSHLFITSSFDWTVKLWSTKHNKPLYSFEDNAD
YVYDVMWSPVHPAMFAAVDGMGRLDLWNLNNDTEVPTASVTVEGASALNRVRWSSAGKEV
AVGDSEGRVWIYDTGELSATHADDWGRFARTLMEIRANQADGEEEGPMELAP
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaaagtgacttaaaggccgagctggagcgcaaaaagcagcggctggctcag
atcagggaggagaaaaagaggaaggaggaggagcggaagaagaaagaggtaaggaaaaac
tctgataatcagaagaagagggagacgaccccagaggattcagacctggatcgcaagcgc
agagaaaccgaggcgctgctccagagtattggaatctcacctgagccgtcactagtgccc
acccccgtgtcaccctccaaatcagtgagcacgcccagtgagacggggagccaggattca
gctgatggcggggcagcgagcaggtttaggtcagggttctctcagtaccagtcccacgcg
cagatctcaaggacgcttcagtgggacacagacccctctgtgctgcagctgcaggctgat
tctgagctggggcgcaggatgcagcgtttgggagcctccaagatcacacaggtggacttc
ctccccagagagatggtgtcttacagcaaggagacgcagacgccgctcaacgcccacctg
tctgaagtagaagaggaagaggaggatgaggagatggcgcaggtcaagccgggtctggag
tcggagcagcaggatgacgaggacagcagggagactaaggaaggatgctttggggcgctg
cgggagctgacggaggaggagaggcagcagatcctgcactcctcggagttccagagcttc
ctcgactgcagcatccgcgtggtggagcgagcgctggccgaagacggcgacatctttttt
gattacggcggccgcgacctggaggacaaagagggagacttgggctccgggtcccgcctg
gctttgtgcagactcttctatgacgagcactggtccaagcatcgcgtgatcacctgcctg
gactggtcccctcagtaccccgagctgctggttgcctcctacaacaataacgaagacgcg
cctcacgagccggacggcgtcgcccttgtgtggaacatcaagttcaagaaggccacacca
gagtacatctttcattgtcagtctcctgtagtgtctgtgggatttgccaggtttcaccct
aacctggtggtggggggcacctactcgggacagattgtcctgtgggacaaccgcagccac
cgccggactcctgtccagaggactcccctctccgctgctgcacacacacacccggtttac
tgcgtcaacgtggtgggcacccagaacgccaacaacctgatcaccgtgtccacggatggc
aggatgtgctcctggagcctggacatgctctctcagcctcaggagaccatggagctggtg
tacaacaaatccaagcccgtcgctgtgacgtgcatggcgttccccacaggagacgtcaac
aactacgtggtgggcagcgaggaggggacggtctacaccgcgtccaggcacggcagcaaa
gcaggcatctgtgagatgttcgagggccaccaggggcccgtgacaggcatcagctgccac
ggcgccgtcggcaccgtcgacttctcccacctcttcatcacgtcttcttttgactggacc
gtcaaactctggagcacaaagcacaacaagcctctgtactccttcgaggacaacgccgac
tatgtctatgacgtcatgtggtcgcccgtgcatcccgccatgtttgccgccgtggacggc
atgggccgcctggacctctggaacctcaacaacgacaccgaggtaccgactgccagtgtg
accgtagagggcgcctccgccctcaacagggtccgctggtcttccgcgggtaaagaagta
gctgtgggggactcggaaggacgcgtgtggatctacgacacaggagagctgtcggcgacc
cacgccgacgactggggccgcttcgcccggaccctgatggagatccgcgccaaccaggct
gacggcgaggaggaggggcctatggagctggctccgtag
DBGET
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