Takifugu rubripes (torafugu): 105417228
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Entry
105417228 CDS
T02386
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X6
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105417228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
105417228
03036 Chromosome and associated proteins [BR:
tru03036
]
105417228
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105417228
Coactivators
SAGA/TFTC/STAGA complex
105417228
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105417228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
105417228
NCBI-ProteinID:
XP_011607867
Ensembl:
ENSTRUG00000015791
LinkDB
All DBs
Position
13:complement(5402527..5481144)
Genome browser
AA seq
1037 aa
AA seq
DB search
MAGTSDPLEDMLFSEVDEKAVSDLVGSLESQLAGQSKPAGKAEENGGAGSVPPANHHLGK
TLPAPVGTTTPEQQQQGRRNKPEMHQDSKSKDVSPDKTSTSPSQRCSPPFGEPSTTSAAG
VNATSSGSVSHPTSVTTLIASAVSALATTQARISTPLDRGCKIAPGTGEASTESNLPRKR
ITTPRRAASARIKSLNGTAVTTRRSSNTGMAENVNVSPVGMNTTTHNSTPAVRSPINTST
FTLSNANLPVGQSAIALDRGTPTIALQRLPNHIVAIAQNGNGTSVSALVQQSTRTAPVGL
MASSVNQDREVTDTAACKKDDYQSKIVLSSHSGTVNSVINAVPAAPSVVTPTPTTTAAAT
TTTTVTQPLSSAATPACSSGAVPTTTACATSQTTTVTTTLTMIRPTAPSPTATVATTAPG
QPRPGLTAPQRIVAPQLIVRPTQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQHALAQ
VQAQAQTQAQNNMSPRPATPTTGTSFRVAAPQAPLAPAVAVMAPQQTPVVMTPQALSQAP
SQPVQPPQSGIAATSSAPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKGLVQ
DLLDAKIEPEEFTSRLQAELKSSPQPYLVPFLKKSLPALRLSLLNSQHSLTQPPQQGVKA
APSGTAPAMVTGSAVRIHHPNSVSTTGGASTLPAGTVGHAGAMGVKTAGPVGGHIRMPVV
ITQSVRPQGAMGKGTIIQAGKSPLGMAVQISGNQKNSLNDPGGGSFRDDDDINDVASMAG
VNLNEESARILATNSELVGTQIRSCKDETFLQPGLLHRRILEIAKKFGVAEVPMETVTFI
SHAAQSRLRTVIEKVSAVAQHRMDSCKDDEYYEQTADVRSQLRFFEQLERIEKQRKDEQE
REILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDS
PGATLSGTENLPQILVSLLMLASTATVISTVLKNPLSFILEILKNDSEKLVHLSQADSTT
TMVCSPECPKNPLNIYN
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcacctcagaccccctggaagatatgctcttttcagaggtggatgagaaagcc
gtcagcgatctggtgggctcattggagtcacagcttgctggccaaagcaaaccagcaggg
aaagcagaagaaaacggaggcgctggctcagtgccccccgcaaaccatcacttaggaaaa
acattaccagctccagtgggcaccacaacaccagaacaacaacaacaaggacggcgtaat
aaacccgagatgcaccaagacagcaaatccaaagacgttagcccggataaaacttccacg
tctccttcccagcgctgctcccctccttttggcgagccgtccacgacttcggctgccggt
gtgaacgcgactagtagcggctcagtgtcacatccaacgtccgtcacaacactgatcgca
tctgctgtgtcagctttggcaaccacgcaagccaggatcagcaccccattagatcggggg
tgcaagattgcccctggaacaggtgaggcatccacggagtcgaacctaccgaggaaacgt
atcaccactccacggagagcagcttcagctcgcataaagagtttgaacggcacagctgta
acgacgagaaggagcagcaacacaggcatggcagaaaacgtcaacgttagtcccgtgggc
atgaatacaactacacacaactccactccagcggtgagatcccctatcaacacctcaaca
tttactttatccaacgctaaccttccggttggtcagtcggctattgctctcgaccggggg
actccgaccattgctctgcagagactcccgaaccacatcgtagcgattgcacagaacgga
aacgggaccagtgtttcggccttggtccagcagagcacacggacagcccccgttggactt
atggcatcatcggtaaatcaagacagagaggtcacagacacggcggcatgcaaaaaagat
gattatcagtccaaaattgtgttgtccagccattctggcactgtcaactctgtcataaat
gcagttcctgcagcacccagtgttgttaccccaacaccaacgaccacagcagcagccacc
actaccacaacagtgacccagcctttgagctctgcagccactcctgcctgttcttcaggt
gcagtaccaacaacaactgcatgtgcaacttctcagactacaacagtgaccaccactctt
acaatgatcaggcccacagccccctctcccacagctactgtggccaccacagcaccaggt
cagccccgacccggacttacagcaccgcaaaggattgttgccccccagctgattgtcaga
ccaactcagcagcagacaaccattcaattgccccctggatttaccatcccaccgggaatg
gtgttggtgcgcacagagctgggccagctggttatggttccacagcacgctctggctcag
gttcaggctcaagcccagacccaggcccagaacaacatgtccccacgacctgccaccccc
acaacaggcacatctttcagagtagcagctccacaggcccccctggcaccagccgtggct
gtgatggctccacagcagacccctgtagttatgaccccccaggccctcagccaggctcca
tcccagcctgtgcagccaccgcagtcaggcattgccgcaacctccagtgcccctgtcgtg
tcccaggaaatgcaggagaatgtcaagaagtgtaaaaatttcctggctaccctcatcaag
ctggcatctcacaattctccatctcctgagacttctaaaaatgtcaagggtctggttcag
gatctgctggatgccaaaattgaaccagaggaattcaccagtcggctccaggcagagctc
aagtcttccccacagccgtatctggtgccatttctcaagaagagtctcccggccctgcgg
ctgtctttactgaatagtcagcactccctgacgcagcccccacagcagggagtcaaagca
gcacccagtggcactgccccagcgatggtgactgggtcagctgtgcgaatacaccatcct
aacagtgtcagcaccactgggggagccagcacactgcctgctgggacagttggacatgca
ggtgccatgggtgtgaagacagcaggtcctgttggtggccatatcaggatgcctgtggtc
atcacacagtctgtcaggccacaaggtgcaatggggaagggaactatcatccaagcaggc
aaaagtcctctgggtatggctgttcagatctctgggaatcagaaaaacagtctcaatgac
cccggaggaggctctttcagggatgacgatgacattaatgatgtcgcctccatggccgga
gtaaacctgaacgaggagagcgccagaatactggccaccaactctgaactggtgggaacg
caaatccgctcatgtaaggatgaaacctttctccaaccaggattgctccatcggcgaata
ctggaaatagccaagaagtttggagtcgcagaggtccctatggagacagtgacattcatc
tcacacgcggcacagtcgcgacttcgtactgtcattgaaaaagtttccgctgttgcacaa
catcgaatggactcctgtaaggatgatgagtactatgagcagacggcagacgttcgctct
cagcttcgtttctttgagcagctggagagaatcgagaaacagaggaaggacgagcaggag
agagagatcctgttgaaagccgctaaaagtcgctccaggcaagaggacccagaacaggct
cgactaaaacagaaagctaaggagatgcaacaacaggaactggcccagatgaggcagcga
gatgctaacctgacagcgctagccgccattggacctcgcaaaaaacgtaaagtagactca
ccaggggccacgttatcaggaacagagaatttgccacaaatcttggtgtcactattgatg
ctggcctcaactgccactgtcatatcaacagtgttaaaaaatcctctttctttcatttta
gaaatattaaaaaatgactctgagaaattggtgcatttgtcacaagccgactcgactact
accatggtttgttcaccggaatgtcccaaaaatccattaaacatctacaactga
DBGET
integrated database retrieval system
