Takifugu rubripes (torafugu): 105417876
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Entry
105417876 CDS
T02386
Name
(RefSeq) methyl-CpG-binding domain protein 1 isoform X4
KO
K11589
methyl-CpG-binding domain protein 1
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
105417876
03036 Chromosome and associated proteins [BR:
tru03036
]
105417876
Transcription factors [BR:
tru03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
105417876
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
105417876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CXXC
MBD
Motif
Other DBs
NCBI-GeneID:
105417876
NCBI-ProteinID:
XP_011612635
Ensembl:
ENSTRUG00000013422
LinkDB
All DBs
Position
19:16806923..16813783
Genome browser
AA seq
803 aa
AA seq
DB search
MSQEPESPVPSKEPEENLGEITDEDNTEDGSTSEEAAQDPMEPSQPKTERPNSVAVREIL
GEEMEDSKAAFDEAPVDWFEPVEEDEEFDGIGKKDPEEESVAGESERSESVYGSEKAYKK
VFHRVPRRRRSHPDEGWVEWPVLGEGWKRKEVVRRSGCSMGQKDVYYMGPHGDRFRSRVE
LVSVLNGILDLTTFDYKTGQFWDGKIPPIRSRTRKRKARERSSSESSWMERDEGADTPDS
LHTLTPSLGAKNHCNQDSSHRYPPAEDKIKLPLFSQSSRRMPVPSINGEIGSEDKTLVCA
KCGVSFTGTWYDKQRKRPCCPMCWAASKHKEHPMIRFRKWIPCGQCVGCHNTVNCGQCAN
CKHGTQSPESRRRLCRKRKCICPVRKGSGSGSFLQQMSYDSPDPITDGVRLKAEVTDPQY
PSFKSSDTENLSLSLDMDDEDDVSTDDDEDWHKKRKRRSCGECKACLCRKDCGTCDFCID
KPKFGGSNKKRQKCRLRQCQRQAMRHLLPFQMGQDDCEQDGAAPPGRPRPHYTYSRKSTF
KKNKGAASGLDLTDNEDDNSNSKVISWSTEPAGPPTETDVRSKQASKELVNDLDSGQKNG
LPEKDVKVNHLDSELEHLSRWDAEKSHPVRDSPKHPDEDEKEEFPKITETFSLADVPAGS
AADAESQLMKLLQSLRTTVLPILWYAIMVQGPQLQLIQCSKRSTMTDTIVIIDPGFYYKI
TVQKQPLLPTHPLYDQHPGRLTSAGEVVNLLLALEKYVVCHGLPPKQNFYYKDPLILERA
STCHFLVKKKEGVCSNCQALRGF
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagaacctgagagtcctgttccttccaaggaacctgaggaaaatttgggagaa
atcacagatgaggacaacactgaggatggatccacttcagaggaagcagctcaggatcca
atggaaccctcacaacctaaaacagaacgccccaattcagtcgcggtccgggaaattctg
ggagaggaaatggaggactcaaaggccgcgttcgacgaggcccccgttgattggttcgag
cctgtggaggaggacgaggagtttgacggcattggcaagaaggatccagaagaggaaagt
gttgcaggagaaagtgaacggagcgagagcgtgtacggcagcgagaaggcctacaagaag
gtctttcaccgcgttccccgccgtcgacgctcacatccggacgaaggatgggtcgagtgg
cccgtgcttggagagggctggaaacggaaggaagttgtccggcgctcgggctgcagcatg
gggcagaaagacgtgtattacatgggtccccacggtgaccgttttagaagcagagtggag
ctggtgtcagttctgaatggaatccttgacctgacgacgtttgattacaagacggggcag
ttctgggacggcaaaataccacccataagaagccgaaccagaaagaggaaagcgcgggag
cgttcctcctcagagtccagctggatggagcgagacgaaggcgccgacacccccgactcc
ctccacacactcactcccagcctgggagccaaaaaccactgcaaccaggactccagccac
cgctatccacccgcagaagataaaattaaacttcctcttttctcgcaatcgtccagacgg
atgcctgtaccctcaattaatggagaaattgggtcagaggacaaaaccctggtctgtgcc
aaatgtggcgtgtccttcacaggaacctggtacgacaagcagaggaagcggccctgctgc
ccgatgtgctgggcagcatctaagcataaagagcatcccatgattcgcttcagaaagtgg
atcccgtgtggtcagtgcgtcggctgccacaacacggtgaactgcgggcagtgcgccaac
tgcaaacacgggacgcagagccccgagtcccggagacgtctgtgtcgaaaacgcaaatgc
atctgtcccgttcgcaagggttctgggagcggaagtttcctccagcagatgagttacgac
agtcccgacccaattactgatggcgtgaggttaaaggctgaagtcacagacccgcagtac
ccgagttttaaaagcagcgacacggagaacctctcgctcagcctggacatggacgacgaa
gacgacgtgtcgacggacgacgacgaggactggcataagaagcgaaagcggcgatcctgt
ggagaatgtaaagcctgtctatgcaggaaagactgtggcacatgtgatttctgcatagac
aaacccaaattcggtggtagcaataagaagcgacagaagtgccgattacgtcagtgtcag
agacaggcaatgagacacttgttgcctttccagatgggacaagatgactgcgagcaggac
ggcgcggcgccgccgggcaggccgaggcctcactacacgtacagccgcaagtcaacattc
aagaaaaataaaggggcggcttctggtctggacctgactgacaatgaagatgacaacagc
aactctaaagtgataagttggagcacggaaccggctggaccccccactgaaaccgatgtg
agaagcaaacaggcgtccaaagagcttgtgaatgatttggattctgggcagaagaacgga
ttacccgagaaggacgttaaagtcaaccacctcgactccgagctggagcacctcagcaga
tgggatgcagaaaaatcccacccggtcagagacagtcccaagcatcctgatgaagatgaa
aaggaggaattccccaaaataacggaaaccttcagtttggcggacgtcccagccgggagc
gccgcggacgcagagagccagctcatgaagctgctccagtctctacgcaccaccgtgctg
ccaatcctttggtacgccataatggtgcaaggcccacagctgcagctcatccagtgctcc
aaacgctccaccatgactgacactatagtgatcatcgacccgggcttctactataagatc
acggtccagaagcagccgctgctccccacccacccgctctacgaccagcacccgggacgc
ctgacctcggccggcgaagtcgtcaatctgcttttagccctggagaagtatgtcgtgtgt
cacggacttccccctaaacagaatttttattacaaagaccccctcatattggagcgagcg
tccacctgccacttcttagttaaaaagaaagaaggcgtctgtagtaattgtcaagcgctg
cgaggattttaa
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