KEGG   Takifugu rubripes (torafugu): 105417966
Entry
105417966         CDS       T02386                                 
Symbol
uba52
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03010  Ribosome
tru04120  Ubiquitin mediated proteolysis
tru04137  Mitophagy - animal
tru04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    105417966 (uba52)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105417966 (uba52)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    105417966 (uba52)
   04137 Mitophagy - animal
    105417966 (uba52)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tru03011]
    105417966 (uba52)
   04121 Ubiquitin system [BR:tru04121]
    105417966 (uba52)
Ribosome [BR:tru03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    105417966 (uba52)
  Archaea
    105417966 (uba52)
Ubiquitin system [BR:tru04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   105417966 (uba52)
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 OTU1_UBXL Dsc3_N UBL_UBAC1
Other DBs
NCBI-GeneID: 105417966
NCBI-ProteinID: XP_011613350
Ensembl: ENSTRUG00000004142
UniProt: H2SBM2
LinkDB
Position
20:complement(12766712..12768434)
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRMLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagacgttgacgggaaagaccatcaccctcgaggtggagcccagc
gacacgatcgaaaatgtcaaggcaaagatccaggataaggaaggcattccccccgatcag
cagcgtctgatcttcgctgggaagcagctggaggatggacgcaccctgtctgactacaac
atccagaaagagtccactctgcacctggtgctgcgtctgcgtggtggcatcattgagccc
tctctcagaatgttggcccagaagtacaactgcgacaagatgatctgccgcaagtgttat
gcccgtctgcaccctcgtgccgttaactgccgcaagaagaaatgtggacacaccaacaac
cttcgccccaagaagaagctgaagtag

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