KEGG   Takifugu rubripes (torafugu): 105418327
Entry
105418327         CDS       T02386                                 
Symbol
col13a1
Name
(RefSeq) collagen alpha-1(XIII) chain
  KO
K16617  collagen type XIII alpha
Organism
tru  Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:tru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tru00536]
    105418327 (col13a1)
Glycosaminoglycan binding proteins [BR:tru00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   105418327 (col13a1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 105418327
NCBI-ProteinID: XP_029687849
LinkDB
Position
Unknown
AA seq 554 aa
MGIPGRMGLKGQAGDKGAPGEPGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHNGAK
GDVGERGPKGLPGEPGPKGEKGICGDYTHRGLFVQDLPLKTLAALRSSQALTLKQGEPGA
QGPPGLPGPPGPPGTPGLNGASGSPGKPGEPGKPGKDSRLLPGLKGEPGVPGPKGDRGDI
GPSGPEGPKGEPGLRGHPGSKGEAGTSGTPGIPGKRGYRGEKGQASSSLQGIKGEPGSPG
LPGLMGPKGDKGEHGEKGPAGPTGEAGKMEMNNNENDIRNIHLMGPPGLPGPPGLPGTKG
EVGLPGPPGLDGEKGPRGKAGEQGPAGQPGPEGPRGEVGIMGYPGHKGEKGDLGPSGSPG
LDGPTGEKGAPGAPGSIGLPGVMGPRGEPGEGGRAQMIYGPPGPPGPPGPVGPTGSQGAS
GPKGEPGLGIRGEKGATGQKGDKGDRGHLGLPGAHGLDGRPGPVGLIGPAGMPGPAGPKG
ERGVKGDAGLSGPIGPQGIPGIVGPQGLKGNRGERGKKGNRGAKGDKGDQGAPGLDAPCP
LGDDGLPVPGCWNK
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgggaattcctgggagaatgggcttaaaaggacaagcaggggacaagggagcaccaggt
gagccaggtctgtccatcattggaccaagaggcccccctggacaacctggaaccagagga
ttcccaggctttcctggtccaattgggttggatgggaaaccgggtcacaatggagccaag
ggagacgtgggtgagcgaggccctaaaggactcccaggggaacctggacccaagggggag
aagggaatatgtggagactatacacacaggggcctctttgtgcaggatctgcccctgaaa
accctggctgccttgcgctccagtcaggctctgacgttgaagcagggtgagcctggagca
caaggacccccaggacttccagggccacctggaccccctggaaccccaggtctgaatgga
gctagcggttcacctggtaaacctggtgaaccaggaaagccgggaaaagactcaagactt
ttaccaggactgaagggtgagccaggtgttccgggaccaaagggtgatcgtggggatatc
ggcccatctggtcctgagggcccaaagggagaaccaggcctccgtggccatcctgggtca
aagggagaggctggcacctctgggacccctggcatccccgggaagaggggctacagggga
gagaaaggacaagcaagtagcagcctccaaggaattaaaggagaaccaggttctccagga
ctgccaggcctaatgggcccaaagggtgacaaaggagaacatggagagaagggtccagca
ggtccgactggggaagcaggaaaaatggaaatgaacaacaatgagaatgacattcgtaac
atacatctgatgggtccccctggattaccgggaccccctggactccctggaaccaagggt
gaagtgggtctacctggtcctccaggactagatggagagaagggaccacgtgggaaggca
ggagaacaaggtcctgcaggtcaacctgggccagaaggccccaggggggaagttggcatc
atgggatacccaggacacaaaggagaaaaaggagacctgggtccatctggatcacctggt
ttagatggccctactggtgaaaaaggggctccaggggccccaggctctattggattacct
ggtgtaatgggtcccagaggtgaaccaggagaaggaggaagagcacaaatgatctacggt
cctccagggcccccaggacctccggggccagttggtcctacagggtctcaaggagcatca
gggcccaagggagaaccgggacttggcatcaggggtgagaagggagccacaggtcagaaa
ggtgacaaaggagacagaggtcatcttggacttcctggggctcatgggttagacggcaga
cccggtccagtgggtctaataggaccagcaggtatgccggggccagcaggaccaaaggga
gaaaggggtgtaaaaggagatgctggattatcaggaccaattggacctcaaggcatccct
ggtattgttggaccacaaggactcaaaggcaaccggggagagaggggcaagaaaggcaac
aggggggccaaaggggataagggagaccaaggagcacctggattagatgccccctgtcct
ttgggtgatgacggcttacctgtcccaggatgctggaacaaatga

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