Takifugu rubripes (torafugu): 105418367
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Entry
105418367 CDS
T02386
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru02010
ABC transporters
tru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105418367
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105418367
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tru02000
]
105418367
Transporters [BR:
tru02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
105418367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
105418367
NCBI-ProteinID:
XP_029688027
LinkDB
All DBs
Position
Unknown
AA seq
2289 aa
AA seq
DB search
MSVWTQLSLLLWKNFTSRRRQTLQLLAEIIWPLLIFFILITVRLSYPPYEQHECHFPNKA
MPSAGTLPWLQGILCNANNPCFRSPTPGESPGVVGNFNDSIISRLFSDVKKILLYSQNDK
NLDGFKELSRALQLLQDRRSGFKLKHFLRDNETLSSFLRRNVSFPEDAIQQIREADINLG
KVLLRGFGVHLRDMCPRKGGQQTLEDFVTISDLQTSVLVQEVLCHAPPAWLNLAEEHFLL
NLDFFKPIQRDVRSDPDAVRQVTRATNNLLDSLGSLAVELASMKSWIDLRNEIIFLTQNA
TSSPSTMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNYNSSEEESSLLYDNSST
PYCNSLVKNMDLNPMSRMIWQALKPLLLGKILYTPDTPATQRVIHEVNRTFQELGVFRDL
GGMWEEMRPKAWNFMENSEQMDLIRTLLKNNITASFFHAQLNNTDWTVADVSKFLSKEAE
DSRPAGGSLTWRDVFNETDQAIMSISRFMECVNLNKLEPVPSEETMVNESMVLLEDRKFW
AGIVFTDVDTNASKLPPQLKYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGF
SYLQDLVEHGIIRAMTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVA
IILKSVVYEKEARLKETMRIMGLNNGILWCSWFISSLVPLLISAGLLVLLLKTGNLLPYS
DPGVVFLFLGSYAVVTIMQCFLLSTAFARANLAAACGGIIYFTLYLPYVLCVAWEDYIGF
SSKVFASLLSPVAFGFGCEYFALFEEQGVGIQWKNLVSSPLEEDDFSLRTAIGLMYFDSV
LYGVLTWYLEAVFPGQYGIPRPWYFPFTKSYWFGEKDKTSNKIPLKVNTEAVCIEEEPSH
LKLGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAFILGRDIRAELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYGRLKGMSEQQVKSEIHQ
ILQDTGLPHKRSSRTSSLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LQYRQGRTIILSTHHMDEADMLGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKKEP
EPSLSSCRNSSSTVSFTKKEGECASVSSSDAGLGSEHESEAATAEPGPAASVCEGPFVTP
DVSLVSSLILSHVPAARMVEDLGHELTYVLPYRAAKEGAFVELFKDLDRKLPDLGISSYG
VSDTTLEEIFLKVAEDNGVDTEVPSDGTLPVPRRRKTHAFGGGDHQSCLKPLTEDDSNDG
NESEGDAAECRDTDWLKCSEGKGSHQVTGWSLRRQQFVALMWKRFLYARRSRKGFFAQII
LPAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFISDDAPSDVNMQKLLNALLDAP
GLGTRCMDGHPIPEAPCTMGDEDWNIPEVPESVQQLLNSKNWTMENPSPACFCSCDRNKK
MLPDCPAGAGGLPPPEMKLSATDTLQNLTRRNVSDYLVKTYAEIIGKSLKNKVWVNEFRY
GGFSLGARSTQVLPPANEIDDAIERVRKIFEIKEGAAADRFLDTLSGFINGLDTKNNVKV
WFNNKGWHSIGAFINVINNGILRANLPQENDPSKFGIRAFNHPLNLTKEQLSQVALVTTS
VDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPLLYWVATFTWDMCNYFV
PATLVILIFICFQQNAYVSSTNLPALALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTS
VNILIGINGSISTFVMELFGNNEIGGINDILKNILLIFPHFCLGRGLIDMVKNQAMADAL
ERFGENRLRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFIKPRSVTKLTKLGPVGE
EDEDVARERQKIVHGLGQGDILELRQLTKVFKKKQKPAVDRLCVGIPPGECFGLLGVNGA
GKTTTFKMLTGDTGVTSGEAFLAGKSILREIDQVHQNMGYCPQFDSINDLLTGREHLELY
AVLRGVPANQVCDVAEWGIRKLGLVKYADKAAGSYSGGNMRKLSTAIALIGAPAVVFLDE
PTTGMDPKARRALWNCIHSVIKEGRSIVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQH
LKNRFGDGYTIILRVAGPDPDLQPVMKFIESELSGSTLKERHRNMLQYQLPSSCTSLTHI
FSTLASNKETLRIEDYSVTQTTLDQVFVNFAKDQSDDYHSKDSVRRKDAVINFPMASSDG
EADARESVM
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtggacccagctgagcctgctgctgtggaagaacttcacctccaggcgccga
cagacgctccagctgctggccgagatcatctggcccctgctcatcttcttcatcctcatc
accgtgcgcctcagctaccccccctacgagcagcacgagtgccatttccccaacaaggcc
atgccgtcggctggaacgctgccctggctgcaggggatcctctgcaacgctaacaacccc
tgctttagaagccccacgcctggggagtctcctggtgtcgttgggaactttaatgactca
ataatctctcgcctcttctcggacgtcaagaagattcttctgtacagtcagaacgataaa
aacctggacgggttcaaggagctgtcccgggcgctgcagctgctgcaggaccgtcgctca
ggcttcaagctaaagcacttcctgcgagacaacgaaaccctgtcaagcttcctgcggagg
aacgtctcctttcctgaggacgccattcagcagatcagagaggccgacatcaacctgggg
aaggttctcctcagaggttttggagttcacctgagggacatgtgtcccaggaaggggggg
cagcagacactggaggactttgtgacgatctcagatctacagacgtctgtgctggtgcag
gaagtactgtgtcacgcccctcccgcctggttaaaccttgccgaagaacacttcctgctg
aacctggacttcttcaagcccatccagagagacgtcaggtcagaccctgatgctgtcagg
caggttaccagggcaactaacaaccttctggatagtctgggctcgcttgctgtggagttg
gccagtatgaagagctggattgatctgaggaacgagatcatcttcctgacacaaaatgcc
acatcatcaccgagcaccatgtaccaggcagtctccaggattgtgtgtggtcatccggag
ggtggcggcctgcagatcaaatccctgaactggtacgaggacagcaactacaaggctctg
tttggaaactacaacagcagtgaggaagagtcctcgttgttatacgacaactcgtccact
ccgtactgcaacagtctggtgaagaacatggacttgaacccgatgtcccggatgatctgg
caggctctgaagcctttgctgctggggaagatcctgtacactcctgacactcctgccacc
caacgggtcattcacgaggtcaaccggacctttcaggaactcggtgtgttcagggacctg
gggggcatgtgggaggagatgagacctaaagcgtggaatttcatggaaaacagtgagcag
atggatttgatcaggactctgctgaagaacaacatcaccgctagcttcttccacgctcag
ctgaacaacaccgactggacggttgctgacgtctcgaaattcctgtcaaaagaagcagaa
gactcccggccagcagggggcagcctgacatggagggacgtgtttaatgagactgaccag
gccatcatgagcatctcccgcttcatggagtgtgtgaatctgaacaaactggagcccgtt
cccagcgaggagacgatggtcaacgagtccatggtgctgctggaggacaggaagttctgg
gccggcatcgttttcacagatgtggacaccaacgcctccaagctccccccccaactcaag
tacaagatccgtatggacatcgacaatgtggagcggacaaacaaaatcaaagacgcgtac
tgggaccccggtcctcgcgctgacccttttgaagacatgcgctacatctggggcgggttc
tcttacctgcaggaccttgttgagcacggcatcatcagggccatgacggggacgaaggag
aagacaggagtttacatccagcagatgccgtatccctgttacgttgatgacattttcctc
agggtaatgagccgctccatgcctctgttcatgaccttggcctggatgtactccgtagcc
atcatactgaagagcgtggtgtatgaaaaagaggctcggctgaaggagaccatgaggata
atgggcctgaataatggaatcctgtggtgcagctggtttatcagcagcctggttcctcta
ctgatcagcgctggactgctggtgctgttgctcaagacaggaaacctgctgccctacagt
gaccccggggtagtcttccttttccttggctcctatgctgtggtcacaatcatgcagtgc
ttcctgctcagtactgcatttgctcgagctaatctggcagcagcctgtggtggaatcatc
tactttaccctctacctgccctatgtcctctgtgtcgcctgggaggactacattggcttt
tcatccaaagtttttgctagcctgttgtctcctgtggctttcggcttcgggtgtgagtac
tttgctttgtttgaggagcaaggggttgggattcagtggaagaatctggtctccagtcct
ctggaggaagatgacttcagcctccgtaccgccatcggcttaatgtacttcgactccgtc
ctgtacggagtcctcacgtggtacctcgaggctgttttcccaggtcagtacggcatccct
cgaccctggtactttcccttcaccaagtcttactggtttggagagaaagacaaaacatcc
aacaagattccactgaaagtcaacacagaagcggtgtgtatcgaggaggagccgtctcac
ctaaaactcggagtctacatcgaaaacctggtcaaagtttatcgccatggaaagaagctg
gctgtggatggactgacacttggcttttatgaaggacagatcacttctttcctgggacac
aatggagcaggaaaaaccaccaccatgtccattctgaccggtctctttcctccaacctcc
ggcactgccttcatccttggccgagacatccgggctgagctgagtgccatcagacagagt
ctgggcgtctgtccacagcacaatgttctcttcagcatgttaacagtggaggaacacatc
tggttctatgggcggctcaaaggtatgtctgagcagcaggtgaagtctgagatccaccag
atcctgcaggacactggccttccacacaaacgctcctctcggaccagctctctgtctggt
ggcatgcagaggaagctgtctgtggccctggcctttgttggtggatctaaagtcgtgatc
ctggatgaacctacagctggggttgacccctacgcccgcagaggcatttgggatctgctg
cttcagtaccgacaaggtcgaaccatcatcttgtccactcaccacatggatgaagcagac
atgttaggtgatcggattgccattatttctcatgggaagctctgctgtgtgggctcatct
ctgtacctgaagaaccaactgggaacaggctattatctgacacttgtcaagaaagaacca
gaaccatcactcagttcttgcaggaactcatccagcacagtgtccttcaccaagaaggag
ggggagtgtgcctcagtgagcagcagcgacgcaggactcggcagtgagcacgagagtgaa
gctgctaccgccgagcctggccctgctgcgtctgtgtgtgagggaccatttgtgactcca
gatgtgtctctagtctccagtctgatcctgagccatgtacctgctgcccgcatggtggag
gacctagggcacgaactgacctacgtcctgccatatcgtgctgccaaggagggagccttt
gtggagctctttaaagacttagacaggaagctgcctgaccttggcatttccagctatgga
gtgtctgacactaccctagaagagatctttttaaaggtggctgaagataatggagtggac
actgaagtgccctcagatggtacacttcctgttccgaggaggaggaagactcatgctttt
ggaggaggagaccatcagagttgtctgaagcctttaacagaagacgatagcaacgatggc
aatgagtctgaaggagatgctgcagagtgcagagacactgactggttgaagtgctcagaa
gggaaaggatcccatcaggtgacaggctggagtctgaggagacagcagtttgtggctctg
atgtggaaaagatttctgtacgccaggcgctccaggaagggcttcttcgctcagatcatc
cttcctgccgtgtttgtctgcatcgccctcgtcttcagcctcatcgtcccaccatttgga
aaatatcctagtctggaactgcagccctggatgtacgaggaccaggttaccttcatcagt
gatgatgctccttcagatgtcaacatgcagaagctgctgaatgctctgctggatgctcca
gggttagggacacgctgtatggacggacatcccatcccagaggcgccctgtaccatgggc
gatgaggactggaacattccagaggtccccgagagtgtccagcagctgctcaactctaag
aactggaccatggagaacccgtctccagcctgtttctgcagctgtgacaggaacaagaag
atgctgccagactgtcctgcaggtgctggaggactccctccccctgagatgaagctgagc
gccacagacacgctgcaaaacctgaccagaagaaacgtctcggattacctggtcaaaacc
tacgctgagattatcgggaagagcctgaagaacaaagtgtgggtgaacgagttcagatat
ggaggcttctcattgggggccagaagcactcaggtcctcccgccagccaatgagattgac
gatgcaattgaacgagtcagaaagatctttgagattaaggagggtgctgctgctgatcga
ttcctcgacactttgtctgggtttatcaacggtttggacaccaaaaacaatgtgaaggtc
tggttcaataataaaggatggcacagtatcggcgcattcatcaatgtgatcaataacggc
atcttgagagcaaatctgcctcaagagaacgaccccagcaagttcgggatcagagccttc
aaccaccccctgaacctgaccaaggagcaactgtcacaggttgcactggtaacgacctct
gtggatgtgctggtgtccatctgcgtgatctttgcgatgtccttcgtcccggctagcttc
gtggtcttcctcatccaggaacgagtcagtaaagccaagcacatgcagttcatcagtgga
gtgcagccgctgctctactgggtggccaccttcacctgggacatgtgtaactactttgtc
ccggcaacactcgtcatcctcatcttcatctgtttccaacaaaatgcttacgtgtcgtcc
acaaacctgccggcactggcgctcctgctgctgctctacgggtggtccatcactcccctg
atgtatccggcctccttcttcttcaagatccccagcacagcttacgtggtcctcacaagt
gtcaacatcctcatcggcatcaacggcagcatctcgaccttcgtcatggagttgtttgga
aacaacgaaattggaggaatcaacgatatcctgaagaatattctcctcatctttcctcac
ttctgtctgggacgaggactcatcgacatggtgaagaaccaggccatggccgacgcgctg
gaaagatttggggagaaccgactccgctctcctctggagtgggacatggtggggaagaac
ctcttcgccatggcggtggagggcgtggtcttcttcatcatcacggtcctcatccagtac
agattcttcatcaaacccaggtcagtcactaaactgactaagttaggtccagtaggggag
gaagatgaagatgtggcacgagaaagacagaagattgtccatggccttggacaaggagac
atcctggaactacggcaacttacaaaggtgttcaagaaaaagcagaaaccagcagtggat
cgcctgtgtgtcgggattccacctggagaatgctttgggctgctcggggttaatggagct
ggaaaaacaacaacgtttaaaatgttgactggagacactggagtgaccagcggagaggcc
ttcctggctgggaagagtatcctcagggagatcgaccaggtgcaccagaacatgggctac
tgtcctcagttcgactccatcaacgatctgctgacaggaagagaacacctggaactttac
gctgtcttgaggggggtccctgcaaaccaagtgtgcgacgtggcagagtggggtatcagg
aagctggggctggtgaagtacgctgataaagcagcaggaagctacagcggagggaacatg
aggaagctgtccacagccatcgccctgatcggagccccagccgtcgtcttcctggacgag
cccaccactggcatggaccccaaagcccgccgggccctctggaactgcatccacagcgta
atcaaggaggggcgttccatcgttctcacctcacacagcatggaggagtgtgaggcgttg
tgcacgcgcatggccatcatggtgaacggcaggttcaggtgtctgggcagcgtccagcac
ctgaagaacagattcggggatggatacaccatcatcctgcgggtggccggaccggacccg
gacctgcagcccgtcatgaagttcatcgagagcgagctgagcggcagcacgctgaaggag
cgacatcgcaacatgctgcagtatcagctgccctcgtcctgcacctccctcactcacatc
ttctccacactcgccagcaacaaggagacgctcagaatcgaggactactccgtcacccag
accacgctggaccaggtgtttgtgaactttgcaaaagatcaaagcgatgactatcattcc
aaagattccgtgagaaggaaggacgctgtcatcaactttccgatggcgagctcggacggc
gaagctgacgcgagggagagcgtcatgtga
DBGET
integrated database retrieval system
