Takifugu rubripes (torafugu): 105418679
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Entry
105418679 CDS
T02386
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105418679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
105418679
Membrane trafficking [BR:
tru04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105418679
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
Clathrin
zf-Vps39_C
PLATZ
Motif
Other DBs
NCBI-GeneID:
105418679
NCBI-ProteinID:
XP_011617049
Ensembl:
ENSTRUG00000024384
LinkDB
All DBs
Position
2:complement(6004606..6010715)
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AA seq
894 aa
AA seq
DB search
MLTSISCQAVVTCGGSAKSHFINFRKNSGGKDSSREVGTAEFGSFLKLILSLKIRNLDIS
LMAFRPFTQKHVFKKLVAPKERDKASIHSLECYGQNLYIGTKNASVQHLIFPRSSDGDQH
PGQWSVREGRTRKLGSTSSVAQLRAIPLFNHLLVLCDRSIAALNMFSLEPIPALKKIQHV
SLFEVWNPLLPDQTPHVQMVTSSSRRKVIQIHMVGVDSWEVMKEIFVLQDPVALAVDGSS
MCYATTDKYLLCDIHTGSSEELFPHSHSRQQAIVFSVGQGEFLLNGPEYLGMFVMKTGTC
QRPPLQWPREVLAAAMCFPYIVTLQPQFLSIYSMVDLQQKQTVNLQGAKGLLSASDGVLV
FTERDVFSLRLVPFQEQIQALVQEGKVEEDSLLLDGVQARCLPDSCKQELQQNISCLAGF
AKFYKQDFPEAKDLFIKGHLDPREIIQLYPDMQSIIGIDFHSQLHEKNKIKNLRSRWEED
RSVFLSYLYFLEEFLLTVRDTQQVLASVKEVDSALLRLYVELGDAESLQQFVASPNKCEL
DLCVPVLEKHKRFYALGSLFQSHGKLTDAIQIWVNLADGIHKDDSFTDVYEHIVWTLSEM
QDRDVVWKFADWTLKRNQEIGVHIFTGRRPEDQVESGDVLALLEEYPLAMLLYLEFLIHN
LKSEEERHHNYLALAYADRILQVGEEMHLKTREKLQQHLWESKFYDISIVYEHVKSTFLH
KEKAILLGRAGKYSEAFHLLVQGHDPKTAEAYCFRAAQGRDSQFRETLFLTLLQIYLSSE
DLISATVDLLSNNPGVFAATKVVHLLPDSWSVQLASKFLFGSFRETLHQRRMTMLQKALS
EAELMRHNVMRMQASKTKFRLDRGQTCDVCQKEFAEPQFCSLHGNMMHLDCAGS
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaagtatttcctgtcaggctgtggtcacatgtggaggcagtgccaagtctcat
ttcataaacttcagaaagaattcaggaggaaaggacagcagcagagaggtagggacagct
gaatttggcagtttcctcaagctgattttgtctttaaaaatcagaaatcttgacatttct
ctgatggcttttagaccatttacccaaaaacatgtttttaaaaaactagtggcaccgaaa
gaaagggacaaagccagcattcacagccttgagtgctatggacaaaatctgtatataggg
acaaaaaatgcatcagtccagcatctcattttccctcgtagcagcgatggagatcaacat
cctggccagtggagcgtcagagagggcagaacaagaaaacttggttctaccagcagtgta
gctcaactgagggccatcccccttttcaaccatctgttggttctctgtgatcgtagcatc
gctgccctcaacatgttttccttagaacccattccagctctgaagaaaatccagcacgtc
tctttgtttgaggtgtggaacccgttgctcccagaccagacaccgcatgtgcagatggtg
acctcctccagtcgcagaaaggtgatccagatccacatggtaggagtggacagttgggag
gtgatgaaggagatctttgtcctccaggaccccgtagcccttgcggtagatggcagtagc
atgtgttacgccactaccgacaaatacctcctgtgcgatattcacacagggagcagcgag
gagcttttccctcacagccacagcaggcaacaggccattgtcttctccgtgggacaaggg
gaattcctcttgaacgggcctgaatatttaggcatgtttgtgatgaagacagggacatgc
cagcgtcctccccttcagtggccccgggaggtgctggcagccgccatgtgtttcccctac
atagtaaccctgcagccccaattcctgtccatttacagcatggtggatcttcagcagaag
cagactgtgaaccttcaaggggccaagggtctgctctctgcatcagatggcgtgttagtg
ttcacagagagagacgttttcagcctccgactggtgccgttccaagagcaaatccaggca
cttgtacaggaagggaaggtcgaggaggactcactgttgctggacggagtgcaggcccgt
tgtttgcccgactcatgcaagcaggagctgcagcagaatatctcttgcctagctggcttt
gctaaattttataaacaggattttcctgaggctaaagatcttttcattaaaggtcatctg
gacccgagagaaatcatccaactgtacccggacatgcagtcaattatcggaatagacttt
cattctcagcttcatgaaaaaaacaagataaaaaatctccgttcacgctgggaagaggac
agaagtgtctttctgtcttacctttacttcttggaagagtttctcctaactgtcagagac
acccagcaagtgctggcgtccgttaaagaagttgacagcgccctcttgcgtttgtatgtg
gaactgggagacgctgaatctctgcagcagtttgttgcgtctcccaacaaatgcgaactg
gacctctgtgttcctgttctggagaagcacaaaaggttttacgcattaggttctctcttc
caaagtcacggaaaattaacggacgcaattcagatttgggtgaaccttgcagatggtatc
cacaaagatgactcattcacagatgtatatgaacacatagtttggactctaagtgaaatg
caagacagagatgttgtgtggaaatttgcagactggacgttaaaaagaaaccaggagata
ggtgtgcatattttcactgggcgtcgtccagaagatcaagtggaatctggagatgtcctg
gctcttttagaggagtatccactggcaatgcttttgtatctggagttcttaatacacaac
ttaaaaagtgaggaggagagacatcacaactatcttgccctggcttatgctgatcggata
ctgcaagtgggggaggaaatgcatttaaagacaagagagaagttgcagcagcatttatgg
gaatctaaattctatgacatttccattgtgtatgagcatgtcaaatcaacattcctgcac
aaggagaaagccattctccttggcagagcaggaaaatactctgaagcatttcatctgctt
gttcagggtcatgaccctaaaacagcagaggcctactgcttcagggctgcacaaggcaga
gactcacagttcagggagaccctgtttctcaccctgctccaaatatacctgagctccgag
gacctcatcagcgccactgtagatcttctcagtaacaatcctggggtctttgcagcaacg
aaggtcgtccatctgctgcctgactcctggtctgttcagcttgcctccaagttcttattt
ggatcttttagagagactttgcaccagaggcgaatgacaatgctgcagaaggcgctgagt
gaggcagagctcatgcggcacaatgtcatgcggatgcaggcctcaaaaacaaagttccga
ctggacagagggcagacgtgtgatgtctgccagaaagagtttgcagaaccacaattttgt
agcctccatggaaacatgatgcacttagactgtgctggatcttag
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