Takifugu rubripes (torafugu): 105419156
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Entry
105419156 CDS
T02386
Symbol
ss18l1
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105419156 (ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tru03036
]
105419156 (ss18l1)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105419156 (ss18l1)
GBAF(ncBAF) complex
105419156 (ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
105419156
NCBI-ProteinID:
XP_029689510
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All DBs
Position
3:complement(13532743..13540167)
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AA seq
393 aa
AA seq
DB search
MSVAFPSARPRSKGEVTQQAIQKMLDENHHLIQCIMDHQSKGKLAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTANMSMGPGGISQGGNLNDNGPPTSMMPSQMSNGAGHAHMQ
QQPANPNSSFGSSASGYSHPTPLSQGSTLQGPGPGHGSSSSSAPSSSSCSHSNHNMQSHR
GEPVSMMHQQSATPHYSSAQAGGQHYQGQSAMGMMGQGAPGNTMMSQRPMGNYRSSQQGS
AQQYTGQDEFYGEQYGHTQSSSEPINQQYYPDGHGEYSYQPPPYGDQGYDRPFEESSQHY
YEGGNSQYGQQQAQYQPGSGQQPFSQQQYSSQQGYGGQPQGYAPGQAASSQYSQFQQGQG
QQYGSYRSSQGGPGAQPQRSYAYEQGQYGNYQQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttccgtcggcgcgccccaggagtaaaggggaggtgacacaacaggcg
attcagaagatgctggatgaaaaccatcatttaatacagtgtataatggaccaccaaagc
aaaggcaagctggctgagtgcacgcagtatcagcagatcctgcacagaaaccttgtttac
ttggccacaatagcagattccaatcaaaacatgcagtcactcctgcctgcacctcccact
gccaacatgtccatgggtcctggagggatcagccagggggggaacctcaacgacaacggg
ccccccacgtcaatgatgccgagccaaatgagtaacggcgccggccatgcccacatgcag
cagcagccggctaatcccaacagcagctttggtagctcagcttcgggctacagccacccc
acgcccctctcccagggcagcacgctccagggcccggggcctggccatggctcctcttcc
tcctctgcaccctcctcttcctcctgctcccacagtaaccacaacatgcagtcccaccga
ggtgagccagtctcgatgatgcaccaacagtctgccactcctcactattcctcagcccag
gccggtgggcaacactaccagggacagtcggccatgggcatgatgggtcagggggctcca
ggaaacactatgatgtcccaaaggcccatgggaaattaccgctcctcacagcaaggatct
gcacagcagtacacgggacaagatgagttctacggagagcagtatggacacactcagagc
tccagcgagcccataaaccagcagtattaccccgatggtcacggggagtactcgtatcag
ccgccaccatatggtgatcaaggctacgacaggccctttgaagaatcatcacagcactac
tatgaaggaggtaactctcagtacggtcagcagcaggctcagtatcagccgggctccggc
caacagcccttcagccagcagcagtattcctctcaacaaggctacggggggcagccgcag
ggatacgctcctggccaggctgcctcctcccagtactcccagtttcagcagggtcagggc
caacagtacggctcctaccgctcttcccagggaggccctggagcacagccacagaggtcc
tatgcttatgagcagggtcaatatggaaattatcagcaataa
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