Takifugu rubripes (torafugu): 105419460
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Entry
105419460 CDS
T02386
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru02010
ABC transporters
tru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105419460
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105419460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tru02000
]
105419460
Transporters [BR:
tru02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
105419460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_15
AAA_23
MukB
Phosducin
Motif
Other DBs
NCBI-GeneID:
105419460
NCBI-ProteinID:
XP_029695781
LinkDB
All DBs
Position
8:complement(17990525..18079220)
Genome browser
AA seq
2232 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVELLWPLFLFLILVWVRTTSQPFHKGQCHYPNKA
MPSAGVLPWLQGMICTMDNPCQSHPTLGETPGQVNNFNNTILAGILIELQTLVKTRPAVA
ALQSLADDADRLAALSQSDPGTAPAVTLRTILRDDQDFSAHLTDDLSVPAPVVQSLMSAQ
VTLGPMTGITTPSDLRGVLCEGKGLDRYILFGSRAEKEAFQDVSCSLSPLQLINTQRVLL
QNLDGGKLLSEVPSALGRNGTGPPALMVDLARDFLPLFEQAVRLQNSVAFGAARELDFGK
DPVGSLGQLICDRDLSGSNNRSASVRSAGLMGITGMAAGNSSDAFCQVLVATMENTPGLR
YIWSAFKPLLQGKVLYTPDTPAARRLIKEANATFDALGRLRELVDLWDELGPRVWDFFQD
SPRVNALRMLLKNPLFAALVDQRLKGTGWTAELLANFLYNGPPEERPSGMPPYDWRNVYN
ATTEVLTLLSNFLGCLDLNKFVAVPTEGLLVAKAQELLENHTYWAGIVFENLGPDASEAP
PHVKYKIRMDIDEVEGTKKLKDRLWVPGAGDSAFNDLRYMWGGFAYLQDMMDHGIIKAQT
SEAPPLGVYAQQMPYPCYVDDGFIQGISGMLPMMLVLAFMYTVCMSIKSLVLEKELRLKE
VLRAVGIQNAALWAASFTENLVLLTVPCALISVMVKYGGVLQYSDPSLIFVFLLVFCLTT
ITQCFLISVFFSKANLAAACGGLIYFALYLPYVLCYAWSDVMGFPAKVAVSVLSCVAFGY
GCENFAKYEQQGVGIQWSNMSQSPEGGESYTFTLSIIMMLFDAALYWTLTWYIENVFPGQ
YGIPKPWYFPFTASYWCGTTPAMDDDPDLLKDAVAQSEYLEKPPPDVKAGVSIRNLVKIY
KNGKKLAVDGLSVDFYQNHITSFLGHNGAGKTTTMSILTGLFPPTSGTALISGYDIRTDM
DGVRRYLGMCPQHNVLFNELTVEEHVYFYARLKGCSRQQVALEMDQMIADVGLPHKRKEL
AKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTH
HMDEADILGDRIAIISHGKLRCCGSSLFLKKYFGRGYYLTLVRDGAAKMAAQRGGIIQDQ
AQEQRRSCSPDEGIGSRSWSPPDPTGLAAVGQLVRRRVPEAVFLESVGQEITFVLPYSGA
RDGTFAQLFQDLDRAMSDLGLTSYGISDTTLEEIFLKVAEDTGVDASNHEAAELSTRHRR
RSSRASERSGTARPERLSGIKGNGEKLSNKVEDLNRKAAVSGKGSRVITGLDLIRRQFLA
LFIKRFHYARRSRKGLVAQVVLPAVFVCLALIFSLIVPPFSEFPSLELQPWMYDLPQTTF
YSNDGADGVDVSRVVDTLVNSPGFGTRCMMGDPIPNFPCSSRGSEWATPPVDPSIADIFL
NGNWSMSNPSPSCQCSTPERSLMLPDCPPGAGGLPPPQRTQNTTDTLLDLTGRNVTDFLV
KTYKDLGRTRYGGISVGGVNSQVLLTEEEIKAVIGDLRNLLGSFLGNGTDRIFQSAETLL
KRMGTRNNVKVWFYNQAWHSVVSFLSVANNAILRGNLSTPEEARRYGISVSNHPLNLTKE
QLSNAAMAASSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPTVYWLA
NFTWDMCNYIIPCFIVIVIFLCFQQKAYVSPPNLPALILLLLLYGWSITPLMYPASFVFS
VPSTAYVVLTCINLFIGINGSVATFVMELFDDENVAHTNDIVKQVLLIFPHFCLGRGLID
MAKNQAMATLFIGFGEDRFQDPLGWDMVGKNLCAMAIQGAVMFGATILIQYRFFCKPRLV
SVAPLPAEDEDVDVARERRRVHEGWAQDDLLRVCDLTKVYPRKSTPAVDRLCVGVPAAEC
FGLLGINGAGKTTTFKMLTGDIPVSSGEAFLSGYSIRTQMRDVHQNLGYCPQFDAVDELL
TGQEHLEFYARLRGVPENEVTMVAEWGIQKLGLVKYANKSAGTYSGGNKRKLSTAMALIG
SPPVIFLDEPTTGMDPKARRFLWDCILSIIKEGRSVVLTSHSMEECEALCTRMAIMVNGR
FKCLGSIQHLKSRFGDGYTVIVRVGGAPAVLKPVEDFVQEEFPGSVLKEKHHNTLQYQLP
YTRGALAHIFSQFQKNQHRLAIEDYSVSETTLDQVFVNFAREQQAEDDSGAYDNPVDTTD
ELPLRPLQGKEV
NT seq
6699 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacacagttcactctgctcctctggaagaatttcactctgcggaagaga
caaaaggtgcgtctggtggtggagctgctctggccgctcttcctcttcctaatcctggtg
tgggtgcgaaccaccagccagcccttccacaaaggccagtgtcactatcccaacaaggcc
atgccgtcggccggcgtgctgccctggctccagggcatgatctgcaccatggacaacccc
tgtcagagccaccccacgctgggcgagacgccgggacaagtcaacaacttcaacaacacc
atattggccggaatcttgatcgagctccaaaccctggtgaagacgcggccggcggtcgcc
gcgctgcagtcgctcgcggacgacgccgaccggctggctgcgctgtcgcagtccgaccct
ggaaccgctccagccgtgaccctgaggaccatcctcagagacgaccaggacttctccgct
cacctgaccgacgatttgtccgtcccagcgccggtggtccagagcctcatgagcgcccag
gtgacgctgggccctatgacgggcatcacgacgccgagcgacctgaggggcgtcctgtgc
gaggggaagggtctggaccggtacatcctgtttggcagccgggccgagaaggaggccttc
caggacgtcagctgctccctgtctccgctgcagctaattaacacccaacgagtgctgctg
caaaacctcgacggagggaaactgctctccgaggtgccttcggctctggggcgcaacggg
accggcccgccggccctgatggtcgacctcgcccgcgacttcctgccgctgtttgagcag
gcggtccggctgcagaactccgtggccttcggtgcggcccgtgagctggactttggaaaa
gaccccgttggcagcctgggtcagctgatctgcgaccgggatctgtccggctccaacaac
aggtctgccagcgtccggtccgcagggctgatggggatcacggggatggctgcgggcaac
agttcagacgctttctgccaggtcctcgtcgccaccatggagaacacgcccgggctgcgc
tacatctggagcgccttcaagccgctactgcagggaaaagtcctctacacgcccgacacg
cccgccgctcgccgcctgatcaaagaggccaacgccaccttcgacgctctgggtcgcctc
cgggagctggtggacctgtgggacgagctcgggccacgcgtctgggacttcttccaggac
agccctcgagtcaacgcgctccggatgttgctgaagaacccgctgttcgccgccctcgtg
gaccagaggctgaaagggacgggctggaccgccgagctgctggccaacttcctgtacaac
gggcctccggaagagcgtccgtccgggatgcctccgtacgactggaggaacgtttacaac
gccaccaccgaagtgctgacgctgctgtccaacttcctggggtgtttggacctgaataag
ttcgtggcggtccccacggaaggcctcctggtcgccaaagcccaggagctcctggagaac
cacacctactgggccggaatcgtctttgaaaacctcggccccgatgccagcgaagccccg
cctcacgtcaagtacaagatccgcatggacatcgacgaggtggagggcacgaagaagctg
aaggacaggctgtgggttcccggcgccggcgacagcgcgttcaacgacctgcgctacatg
tggggaggcttcgcctacctgcaggacatgatggaccacggcatcatcaaagcccagacc
tcggaggccccgcccctcggcgtgtacgcgcagcagatgccgtacccttgctacgtggac
gacggcttcatccaggggatttcgggaatgctccccatgatgctggtgctggccttcatg
tacaccgtgtgcatgagcatcaaaagcctggtgctggagaaggagctgcggctcaaggag
gtgctgcgcgccgtgggcatccagaacgccgccctctgggccgccagcttcacggagaac
ctggtcctgctcacggtcccctgcgcactcataagcgtcatggtcaagtacgggggcgtc
ctccagtacagcgacccctcgctcatcttcgtcttcctgctggtcttctgcctgaccacc
atcactcagtgcttcctcattagcgtcttcttctccaaagccaacttggcggcggcgtgc
ggcggcctcatctactttgccctctacttgccgtacgtcctttgttacgcctggagcgac
gtcatgggtttccccgccaaggttgccgtgagcgtcctctcgtgcgtggccttcggctac
ggctgcgagaactttgccaaatacgagcagcaaggcgtcgggattcagtggtccaacatg
agccagagtccggagggaggcgagtcctacaccttcaccctgtccatcatcatgatgctc
ttcgacgccgcgctgtactggaccctcacctggtacatcgagaacgtcttcccaggccag
tacgggatccccaagccctggtacttccctttcaccgcctcctactggtgcgggacgaca
ccggcgatggacgatgaccccgacctgctgaaggacgccgtcgcacagagcgaatatctg
gagaaaccgccgcccgacgtgaaggccggcgtctccatccgcaacctggtgaagatctac
aagaacggaaagaagctggccgtggacgggctgagcgtggacttctaccagaaccacatc
acgtctttcctcggccacaacggagccgggaaaaccaccacgatgtccattctgacggga
ctcttcccgcccacgtctggaaccgctctcatcagcggatacgacatccgcacggacatg
gacggcgtccggaggtacctggggatgtgcccgcagcacaacgtcctgttcaacgagctg
acggtggaggagcacgtctacttctacgccaggctgaagggctgcagccgccagcaggtg
gcgctggagatggaccagatgatcgcggacgtcggcctgccccacaagcggaaagaactg
gccaagaacctgtcaggtgggatgcagaggaagctctccgtggccatcgccttcgtgggc
ggctccaaaatcgtcatcctggacgagcccacggcgggggtggacccgtacgcccgccgg
gggatctgggagctgctgctgaagtacaaacaaggccgcaccatcatcctgtccacgcac
cacatggatgaggcggacatcttgggcgaccgcatcgccatcatctcccacggcaagctg
cgctgctgcggctcctcgctcttcctcaagaagtattttggcaggggctactacctcacc
ctggtcagggacggcgcggctaagatggcggcccagaggggcggcatcatccaggatcag
gcccaggagcagaggaggagctgcagccctgacgagggcatcggcagccggagctggagc
ccccccgaccccacaggtctggcggcggtgggtcagctggtgcggcgccgcgtccccgag
gcggtcttcttggagagcgtcgggcaggagatcaccttcgtcctgccttacagcggggcc
agagatggaacctttgctcagctcttccaggatctggaccgggccatgtctgacctcggc
ctcaccagctacggcatctccgacaccacgctggaggagattttcctgaaagtggctgaa
gacactggagtggatgctagcaaccacgaagcggcggagctgtcgaccagacaccgcaga
cgaagctcccgcgcatcggagcggagcggcaccgcccgacccgagcggctgtctggcatc
aaaggaaacggggagaagctctccaacaaggtcgaagacctgaatcggaaggccgccgtc
agcgggaagggatccagggtcatcaccggattggacctgatcaggaggcagttcctggca
ctctttatcaagcgcttccactacgcccgaaggagccgcaagggactcgttgcccaggtg
gtcttacctgccgtctttgtgtgcctcgctctcatcttctccctcatcgtcccaccgttc
tcggagttccccagcctggagctgcagccctggatgtacgacctgcctcagaccaccttc
tacagcaatgacggagcagacggcgtggacgtgtcccgggtggtggacaccttggtcaac
tcgccggggttcgggacccgctgcatgatgggagatccgataccgaattttccctgttcc
tctcggggttctgaatgggccacgccgccggtggatccgtcgatcgccgacatcttcctc
aacgggaactggagcatgtctaacccctccccttcctgccagtgcagcacgcccgagcgc
tccctcatgctgcccgactgtccacccggagcaggaggcctcccgccgcctcagcgcacc
cagaacaccacagacaccttgctggatctaaccgggcgcaacgtgacagatttcctggtc
aagacctacaaggacttgggtagaaccaggtatggagggatctccgtgggcggggtcaat
tcccaggtcctcctgacggaggaggagatcaaggctgtgatcggagacctgagaaacctg
ctgggttcgtttctgggtaacgggaccgatcggatcttccagagcgccgagacgctgctg
aagaggatgggaacccggaacaatgtgaaggtgtggttctacaaccaggcctggcacagc
gtggtgtccttcctcagcgtggccaacaacgccattctgaggggaaacctgtcgaccccg
gaggaagcccggcgctacggcatctccgtgtccaaccacccgctaaacctcaccaaagag
cagctctcgaacgccgccatggccgccagctccaccgacgtggtggtgtccatctgcgtc
atcttcgccatgtccttcatccctgccagctttgtcctcttcctcatccaggagcgggtg
agcaaagccaagcacctgcagtttgtcagcggcgtcaacccgaccgtctactggttggcc
aacttcacctgggacatgtgtaactacatcattccgtgcttcatcgtcatcgtcatcttc
ctctgcttccaacaaaaagcctatgtttcacctcccaacctgcccgctctgattctcctt
ctcctcctgtatgggtggtccatcactcctttgatgtacccggcgtccttcgtcttcagt
gtgcccagcacggcctacgtggtcctgacctgcatcaacctcttcatcggcatcaacggc
agcgtggccaccttcgtcatggagctcttcgatgacgagaacgtcgcccacaccaacgac
atcgtcaagcaggtgttgctgatcttcccgcacttctgtctgggccgagggctgatcgac
atggccaagaaccaggccatggccacgctcttcatcggctttggtgaagatcgattccag
gaccccctcggctgggacatggtggggaagaacctctgcgccatggcgatccagggcgcc
gtcatgttcggcgccaccatcctgatccagtatcggttcttctgtaaacccaggctcgtt
tccgtggcgccgttaccggcggaggacgaggacgtggacgttgcccgggaacggcggcga
gtgcacgagggctgggcccaggacgaccttctgagggtctgtgacctcactaaggtgtat
cctcggaagagcacccccgccgtggacaggctgtgtgtgggcgttcccgctgcggagtgt
ttcgggctgttggggatcaacggcgccggtaaaaccaccaccttcaagatgctgaccggc
gacatccccgtctccagcggggaagccttcctgagtggatacagcatccggacacaaatg
cgggacgtgcaccagaacctggggtactgcccccagtttgatgccgtcgatgagctgcta
accggacaagaacatctggaattttacgcccgcttgcggggggttccggagaacgaggtc
accatggtggccgagtggggcatccagaagctggggctggtcaaatacgccaacaagtcg
gccgggacctacagcggcgggaataaacgcaaactgtccacggcgatggccttgatcgga
tcgcctccggtgattttcctggacgagccgaccacggggatggaccccaaagcccgtcgt
ttcctgtgggattgcatcctgagcatcatcaaagaggggcgctcggtagttctgacgtct
cacagcatggaggagtgcgaggccttgtgtacccgcatggccatcatggtcaacgggcgc
ttcaagtgcctcgggagcatccagcatctgaagagcaggtttggcgacggctacaccgtc
atcgtgcgggtcggcggcgctccggcggtgctgaagccggtggaagacttcgtccaggag
gagttccctggaagcgtcctgaaggagaagcatcacaacacgctgcagtaccagctcccg
tacacacggggagctctggcacacatcttcagccagttccagaagaaccagcaccggctg
gccatcgaggactactcggtgtccgagaccaccctggaccaggtctttgtgaattttgcg
agggagcagcaggcggaggacgactctggagcctacgacaaccccgtggacaccacagac
gagctgcccctgcggcccctgcaggggaaagaggtgtaa
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integrated database retrieval system
