Takifugu rubripes (torafugu): 115247179
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Entry
115247179 CDS
T02386
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
115247179
03041 Spliceosome [BR:
tru03041
]
115247179
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115247179
Spliceosome [BR:
tru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115247179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
115247179
NCBI-ProteinID:
XP_029683749
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All DBs
Position
20:complement(16763801..16769708)
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AA seq
532 aa
AA seq
DB search
MSNTGQNKICLHFLQFYLDPESQIQTQELSSKQSNGSDSKKFKGDSPSKVVHIRKLPDDI
TETEVISLGLPFGNVSNLLMLKTKNQAFLEMNCEDAACNMVGYYSTVMPVIRHQPVYVQF
SNHKELKTDNSPNQERAQAALRAFGASHMAPCAVASSSVLRVVVENLLYPVSLDALCQIF
SKFGTVLRIIVFTKNSQFQALLQYPDAACAQAAKLSLDGQNIYNACCTLRISFSKLTSLN
VKYNNEKSRDFTRPDLPPGDGQPTLEHPSMAAAFAPGIISAAPYAGAAQTFSPSYTIQPA
VFLPPAGVTVPALPGALTSLSLAGAARMGFPSLPAGVCVLLVSNLHPERVTPHCLFILFG
VYGDVMRVKILFNKKETALVQMSDSTQAQLAMSHLNGQKLYGRAVRITVSKHMSVQLPRE
GHEDQGLTKDFSNSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPCVVEDDLKMLFSSSGA
EVKAFKFFQKDHKMALIQMGSVEEAIEALIEFHNHDLGENHHLRVSFSKSSI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacaggtcagaataaaatctgtttgcattttttacagttttacttggaccca
gagagccaaatccagacccaggaactgagttccaaacagtccaatggcagcgacagtaag
aagttcaaaggcgactcgccgtccaaagttgtccacatacgcaaacttcccgacgacatc
acggagacggaggtgatcagcctcggcctgccttttggaaatgtgtccaacctgctgatg
ctgaaaaccaaaaaccaggccttcttggagatgaactgcgaggacgccgcctgcaacatg
gtgggctattattccacggtgatgcccgtcatcagacaccagcccgtctacgttcagttc
tccaaccacaaggagctcaagaccgacaactcgcccaaccaggagagggcccaggcagct
ctccgggccttcggtgcctctcacatggccccttgtgcggtggcctcaagctcggtgctg
agggtggtggtggagaacctgctctaccccgtctcactagacgctctgtgccagatcttc
tcaaagtttggcactgtgctgcggatcatcgtgttcaccaagaacagccagttccaggct
ctgctccagtacccagatgccgcttgtgcccaggctgctaaactgtccctggatggccag
aacatctacaacgcctgctgcaccctgaggattagcttctccaaactcaccagcctcaac
gtcaagtacaacaatgagaagagccgtgacttcaccagacctgacctcccccctggggat
ggccagccgaccctggagcacccgagcatggctgcagcctttgctccaggtatcatctca
gcagctccctatgctggagctgctcagacgttctcaccatcttacaccatccagcctgca
gtgttcctccccccggcaggtgtgacggtccccgccctgcctggagccctgacctcgctc
tccctcgccggggcggccaggatgggattcccttcgctgcccgctggcgtctgcgtgctg
ctcgtcagcaacctccaccccgagagagtcacgccccactgcctctttattctcttcggt
gtttacggcgacgtgatgagagtgaagattctgttcaacaagaaggagacggctctggtc
cagatgtctgacagcacgcaggctcagctagccatgagccacctgaacggccagaagctt
tacggcagggccgtacgcatcaccgtgtccaagcacatgagtgttcagcttccccgtgaa
ggccacgaggaccagggactgaccaaggacttcagcaactcccccctgcaccgcttcaag
aagcccggctccaaaaactactccaacatcttccccccctcggccaccttgcacctctcc
aacatccctccctgtgtggtggaggatgacctgaagatgttgttctccagctcaggagct
gaagtcaaggccttcaagttcttccagaaggaccacaagatggctctgatccagatgggc
tcggtggaggaggccatcgaggctctcatcgagttccacaatcacgatctgggagagaac
catcacctccgggtgtccttctccaagtcctccatctga
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