Takifugu rubripes (torafugu): 115247560
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Entry
115247560 CDS
T02386
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115247560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
115247560
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115247560
mRNA degradation factors
5'-3' decay
Lsm complex
115247560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
115247560
NCBI-ProteinID:
XP_029685521
LinkDB
All DBs
Position
21:complement(418713..420368)
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AA seq
133 aa
AA seq
DB search
MNYVPGTASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDLDKPCDTFLQQVSIEEILEEQRMEQQAKQETEKVKLQALKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtcccagggacagcgagcctcatcgacgacattgacaagaagcacctggtg
ttgctccgagatggcagaacattgatcggctacctcaggagcattgatcagttcgccaac
ctggtgttccaccagacggtcgagcggatccacgtggggaagaagtttggagacatcccg
agaggaatattcatcgtgaggggggagaatgtggttctgctgggagagatcgacctggac
aagccgtgcgacaccttcctgcagcaggtctccatcgaggagatcctggaggagcagcgg
atggagcagcaggccaaacaggagacggagaaggtgaagctgcaggccctgaaggaccga
ggcctgtccatccccaaagccgacaacttagacgaatattaa
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integrated database retrieval system
