Takifugu rubripes (torafugu): 115248163
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Entry
115248163 CDS
T02386
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tru03041
]
115248163
Enzymes [BR:
tru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115248163
Spliceosome [BR:
tru03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
115248163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
115248163
NCBI-ProteinID:
XP_029687648
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MAAPMKRAAHDIEVRKRTDDVLLSDGIYFSSLLLSQAVLDGLSSSGFQKPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFCTIALDFLVLENPTTQVLVLAPTREIAVQIHSVFMAIGC
AMEGLECHVFIGGRAVSQDKHHLKKCHIAVGSPGRIKQLIELGMLSTSSIRLFVLDEADK
LLEEGSFQEQINWIFSSLPENKQMLALSATYPESLAQHLTRYMREPTFVRLNPTDMGLKG
LKQYYKLVQSHSLPHKVFEEKVQHLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLP
AVCISGGLSQDQRLEAMSKLKQYQCRVLISTDLTSRGIDADKVNLVINLDLPQDWETYMH
RIGRAGRFGTQGLAVTYCCHGEEENKLMSIAQKCSLNLSLLPAVLESRLMDDPCDWDVCA
EAATPVTLAKLSSKTERKKHPKLAVDPGEQSNGHRKPEKAPPAPTPAATFEETRRTLAST
KEDCVQGAQQAGPTRKELQDRLPKIPPLSSFKSCRPRFVTLEEAELDFHGFITTGPGRSV
DVIREYGGQEDGEHSVHNECITLDDDSSECLKLCRKWRKSGQSHPRSISSSSSSPSDRNV
EKVAAVSEPQTEARRAAAVPAAKEEPKHTSSEASVPRKHPSSDATLPKPENYNPSGAVKR
STRGDQMAWKSCSEGESRKVRERCGKQRKDVTEMRNREHVGRNEGERDEEEEERSAEAYW
RATYRAWNDYYASVSAFQSQGYPSCYGAAHSWMAAYRMNAVYMEELLKD
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccccatgaagcgagctgcacacgacatagaagtacgaaagagaaccgatgat
gtactgttgtcggacgggatatacttcagctctctgctgctgtctcaggcggttctggat
ggattgtcctcctcgggcttccagaaaccctcgccgatccagctgaaggcgattccactg
ggccgctgcggactcgatttgatcgtgcaggccaaatctggcacagggaagacatgcgtg
ttctgcaccattgccttagattttctggttttggagaatcctacaacacaagttcttgtc
ttggctccaacacgtgagatcgcagtgcagatccactctgtattcatggcaattggctgt
gccatggagggcctggaatgccatgttttcattggtggtagagctgtgagtcaggataaa
caccatctaaagaagtgccacatagcagtgggctcacctggtcgtattaagcagctgatt
gagctgggtatgttatcaacctccagcatcagactctttgtcctggatgaggcagacaag
ctgctggaagagggcagcttccaggagcagataaactggatattttcctctcttcctgag
aacaaacagatgctcgccctgtctgccacctacccagaatcacttgctcaacacctcacc
cgctacatgagagagcctacttttgtcagacttaaccccactgacatgggtcttaaaggt
ttgaagcagtattacaagctagtgcagtcccattctttacctcacaaagtttttgaggag
aaggtgcaacacttgctggagcttttcagtaaaatccccttcaaccaggccctggtgttc
tctaacttgcatacaagggctcagcacctagcagacatcttatcctccaaaggcttacct
gctgtctgcatctcaggtggtctgagtcaggaccagagactggaggccatgtctaaactg
aagcagtaccagtgtagggtgctcatctccacagacctgacctccagaggtatagatgca
gacaaagtcaacctggtgataaatctggacctgccgcaggactgggagacgtatatgcat
cgaattggacgagctggccgatttggcactcaggggctggcagtcacctactgttgccat
ggcgaggaagaaaacaagttgatgagcattgctcaaaagtgcagcctcaacctgtctttg
ttgccagccgtcctggagtccaggttgatggatgacccgtgtgactgggatgtctgtgct
gaagctgccactcctgtcaccttagccaagctgtcctctaagacggagaggaaaaagcat
ccaaagttagctgttgatccgggtgaacagtccaacggtcacaggaagccagaaaaggca
cctccagcgcccacaccggctgcaaccttcgaggaaactcggagaactctggcatcaaca
aaggaagattgtgtgcagggtgcacaacaggctgggccaacccgaaaggagctacaagac
cgcctgccaaagatccccccgctcagctcattcaaaagctgcagacccaggtttgtgact
ctggaggaggcagagctggacttccacggcttcatcaccacaggccctgggagatcggta
gatgtcatcagggagtacggaggtcaagaggatggtgagcacagtgtacacaacgaatgc
atcacgcttgatgatgattcaagtgagtgtttgaagctgtgcaggaaatggaggaaatca
ggtcaatcacatccaaggtcaatctccagttcttcaagttcaccttctgacaggaacgtt
gagaaagtagcagcagtgtctgagcctcaaaccgaagcacgacgggcagcggctgtgccc
gcggccaaggaggagccaaagcacaccagttctgaggcttcagtgccacgaaagcatcca
tcgagtgatgcaactttaccaaaacctgaaaattacaacccgtctggggctgttaaacgc
agcacgcgaggcgatcagatggcatggaaatcctgcagcgagggtgagtcgaggaaggtg
agagaaaggtgtggaaaacagaggaaagatgtgacagaaatgaggaacagagagcacgtg
gggagaaatgagggagagcgcgatgaggaagaggaggagcggagcgccgaagcctactgg
agggccacctacagggcctggaacgactactacgcctctgtgtctgcttttcaaagtcaa
ggttacccaagctgctacggtgcagcccacagctggatggcagcttaccgtatgaatgcc
gtctacatggaggaactcctgaaagactaa
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