Takifugu rubripes (torafugu): 115249061
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Entry
115249061 CDS
T02386
Name
(RefSeq) general transcription factor IIH subunit 5-like isoform X1
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03022
Basal transcription factors
tru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115249061
09124 Replication and repair
03420 Nucleotide excision repair
115249061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
115249061
03400 DNA repair and recombination proteins [BR:
tru03400
]
115249061
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115249061
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115249061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
115249061
NCBI-ProteinID:
XP_029689153
LinkDB
All DBs
Position
3:2759587..2760966
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AA seq
89 aa
AA seq
DB search
MLCFDHFSFHPLICVAVNMVNVHKGVLLGCDPAMKEFLLHLDETMALGRKFILKDLDETH
LFILAEVVQTLQERVGELMDQNSFPITQK
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgttttgaccacttcagtttccatccactcatctgtgtagcagtaaacatggtt
aacgtgcacaaaggtgttcttcttggatgtgatcctgctatgaaagagttcctcctccac
ctggatgagactatggccctcgggaggaagtttatcctcaaagaccttgatgaaactcac
ctttttatattagcagaggtggttcagactctgcaggagagagttggcgagttgatggac
cagaattcctttcctatcacacaaaaataa
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integrated database retrieval system
