Takifugu rubripes (torafugu): 115249570
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Entry
115249570 CDS
T02386
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115249570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tru03009
]
115249570
Ribosome biogenesis [BR:
tru03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115249570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_33
AAA_2
NPHP3_N
TIP49
AAA_28
RNA_helicase
Mg_chelatase
nSTAND3
AAA_17
Rad17
AAA_18
AAA_3
NACHT
ABC_tran
TsaE
IstB_IS21
Vps4_C
ATPase
Viral_helicase1
NB-ARC
Sigma54_activ_2
Sigma54_activat
Zeta_toxin
NTPase_1
DUF815
DUF6480
Motif
Other DBs
NCBI-GeneID:
115249570
NCBI-ProteinID:
XP_029691115
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All DBs
Position
4:740897..755047
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AA seq
861 aa
AA seq
DB search
MKSRGSDWVDNRLRQRVEQWLTSSNCNSVDIAAVALELQNLYRREYGRRKKTAFRIQVEK
AYEEILRESEATDHKPLNKRLKHSHVDTGSSSSSSSSSEESSDGDCQILGNTPSNHMNSS
LTSLYRKAQPDCSTATRDSAGDPGPGPGPGPGPGPGPGPGPSSLTTVTTGGWFIDKSGCP
EKINLDSSEEQPRTKTPSLTDASQLEAEKSQTKFKRKAAASTGTGTAQKAKSKSPELQVP
SLKFEDVGGNEATLMELCKLLIHMHHPEVYQQLGMVPPRGFLLHGPPGCGKTLLAQAVAG
ELQLPMLKVSAPEVVSGVSGESEQKLRELFDLAVSSAPCILFIDEIDAITPKREVASKDM
ERRIVAQMLTCMDDLNSIPAPVMVIGATNRPDSLDPALRRAGRFDREICLGIPDEAARLR
ILKTLCRKLKLPEDLDYQQLARLTPGYVGADLMALCREAAMNAVNRVLIHLGGCPRSSSQ
CSPQHPSTAGSQTHNNDAEGQTTDGDPGAGVQPGQDPPQEPDLRQLLHLLRNKETLSEDR
LVGLSILMSDFQASLASVQPSAKREGFATVPDVTWEDVGALQDIREELTMAILAPVRFPE
QFKLLGLSAPSGVLLTGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQ
VFQRGQNSAPCVIFFDEVDALCPRRSGHESGASVRVVNQLLTEMDGLEARRQVFIMAATN
RPDIIDPAIMRPGRLDKILYVGLPCPADRLSILLTITKGGTRPVLDQDVGLQEIAHDERC
DGFTGADLTALVREASLSALRAFLDTQHASEPASGPRLSSDAASNIRVTRQNFDDAFKKV
CPSVSKKDQKMYEQLRGSISR
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtagaggaagtgactgggtggataatcgtctcaggcagagagtggaacagtgg
ttgacgtccagcaactgcaactctgtggatatcgctgctgttgcccttgaacttcagaac
ctttacagacgggagtacggcagaagaaagaagacggcttttagaatccaagtagaaaaa
gcatatgaggagatcctgagggagtctgaggcgacggaccataaacccctgaataagagg
ctgaagcacagccatgttgacaccggcagcagcagcagcagcagcagcagctccgaggaa
tcatctgatggcgattgccagattttgggaaacactccctccaatcacatgaacagttct
ctcacatccctgtaccgaaaagcacagccggactgcagcacggccacgagggattctgct
ggtgaccctggtcctggtcctggtccaggtccaggtcctggtcctggtcctggtcctggt
cctagttcattaaccacggtgactacaggaggctggttcattgataaaagcggatgcccc
gagaagatcaacctggactccagtgaagagcagcccagaaccaaaactccaagtctcaca
gacgcgtcccagctggaagccgagaaatcccagaccaagttcaaaaggaaagcggcggcg
tccacgggaaccggcaccgcccagaaagcaaagtcaaagtcaccggagctgcaggttcct
tctctgaagtttgaggatgtgggaggaaatgaagcgactttaatggagctctgtaagctg
ctgattcacatgcaccatccagaggtttaccagcaacttggaatggttcctccaaggggc
ttcctgctgcacggaccccccggctgtggaaagaccttgctggcccaggccgtggctggg
gagctgcagctgcccatgctgaaggtctctgctccagaggtggtttctggagtgtctggg
gagtctgagcagaagctcagagagctgtttgacctggctgtgagctctgccccgtgtatc
ctcttcatagatgagatagacgccattacccccaagagagaagtggcctctaaagacatg
gagaggaggatcgttgcgcagatgctaacttgcatggacgatttgaacagtattccagcg
ccagtcatggtcatcggtgccaccaacaggcccgactccctggatcctgccctccgcaga
gctggacgctttgaccgggaaatttgcctcggaattcccgatgaagcggcgcgtctccgg
atcctgaaaacattgtgtcgaaagctaaagctgcccgaagacctggactaccagcagctg
gcccggctcaccccaggctacgtgggagcagatctcatggctctgtgtcgggaagctgcc
atgaatgcagtcaacagagtcctgatacacctgggaggttgcccgaggagctccagtcag
tgctcccctcaacatccctcaacagctggatctcagacccacaacaacgatgcagagggc
cagaccacagacggcgacccaggagctggtgtgcagccaggacaggatcctccacaggaa
ccagatctgaggcagctgttacaccttctgaggaacaaggagaccctgtccgaggacagg
ttggtcggcctctccatcctgatgtcagacttccaggcgtctctggccagcgtgcagcct
tcagccaagagggagggcttcgccaccgtgcctgatgtcacctgggaggacgtgggcgct
ctgcaggacatcagagaggagctcaccatggccatcctggctccggtgcgtttcccagag
cagttcaagcttctggggctcagtgctccatctggtgtcctgttaactggacctccagga
tgtggaaagaccctgctggccaaggccgtggccaacgaatcaggactcaatttcatctct
gtcaaaggtcccgagctgctgaacatgtacgtcggtgagagtgagcgggcggtcagacag
gtcttccagagaggacagaactcagctccctgtgtcatcttctttgatgaggtggacgcg
ctgtgtccccgacgatcaggccacgagtccggggccagtgtacgggtggtcaaccagctg
ctgacagagatggacggtctggaggcccgccggcaggtgttcatcatggcagcaaccaac
aggccagatatcatcgaccctgcgataatgcggccgggtcggctcgataaaatcctgtat
gtgggtctgccctgtccagcagaccgtctgtccatcctgctcactataactaaggggggg
acccgacctgtgctggaccaggacgtgggcctccaggagatcgcccacgacgaacgctgt
gatggtttcaccggcgcggacctgacggcgttggtgagggaagcctccctcagtgctctg
agggccttcctggacactcagcacgcctcggaaccggcttcaggtcccagattgtccagc
gacgctgcgtccaacatcagagtgacccggcagaactttgacgatgccttcaaaaaagtt
tgtccgtcagtgtccaaaaaggaccagaagatgtacgagcagctcagaggctccatcagc
agataa
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