Takifugu rubripes (torafugu): 115249907
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Entry
115249907 CDS
T02386
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04010
MAPK signaling pathway
tru04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115249907
04020 Calcium signaling pathway
115249907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tru04040
]
115249907
Ion channels [BR:
tru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115249907
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
ETRAMP
TMEM208_SND2
DUF4834
Motif
Other DBs
NCBI-GeneID:
115249907
NCBI-ProteinID:
XP_029692362
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All DBs
Position
5:6616270..6634843
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AA seq
1053 aa
AA seq
DB search
MTLKVVSMGLYMGEQAYLRSSWNVLDGFLVFVSLVDIVVSMAGGAKILGVLRVLRLLRTL
RPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCLGPDV
KNITNKSDCLQANYKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVAVDQQPV
TNNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRQRRMEKK
RRKAQKMPYYASYGHVRSMIHTLCTNHYLDLIITFIIAINVITMSLEHFNQPHSLDLVLK
YCNYFFTSTFVLESILKLIAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEISAALPIN
PTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVEL
FGELVCNADYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDHNTEVD
YNCNPSLQFISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEEAEMDAEIELELA
QGTLCCMGAPGCGGARADKGAGGAAAMAERGVSRREKGDGVRASQRPTAPPQPGVYSPSQ
ESQWLDSVSLLIQDTLEGEMLMIDNLSGSVFHHYSSPPICKDCKGHLQEIRMAEIEQASL
RSEQLSDKSSSPALPDDLSLDEHTAFRLLTQEATERCSSDSHGSADAGGVGGHQTQTVVQ
TQVQGSHPPCPAISPGVEIKSALQELEKHSHHLRLYSPHCSPEFFHPARAAIPAPPRSRS
LRLTRGLRLTSPASWASLQSPGAHSKMLCTQFPSHSDSSLATGSSEGSLQTTLEEGLSFS
VSPPQNLQFPLPAVPLPLVCPLQLPEDSTTFSSPVQILRPRLNPSSSRTLRATIGHQRSQ
SSGRGSTSPGYTRDDSIDPSDEDLGIVIGSSIGGCGSSQAGNSEHLSETMSSLSLTSLLS
PNSLVSSGSAVKKCNSTGSLEQGGMLLASRGREGRREILGLKLRDSQGFLANPWTGIHTD
ARRGKGRGELGDGGKGWAKSSSQTTLGPCRENR
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcaaggttgtctccatgggcctctacatgggcgaacaggcctacctgaggagc
agctggaacgttctggatggcttcctggtctttgtgtctttagttgacattgtcgtgtcc
atggcgggcggggccaagatccttggggtgctccgggtgctccgactgctcagaactctg
cgcccgctgagagtgatcagccgggctccaggtctgaagctggtggtggagaccctcatc
acctccctcaaacccatcggcaacattgtcctcatctgctgcgccttcttcatcatcttc
ggcatcctcggggtgcagttgttcaaaggcaagtttttctactgcctcggtcccgatgtc
aaaaatatcaccaacaaatcggactgtctgcaagccaactacaagtgggtccatcataag
tacaactttgacaacctgggacaggctctgatgtcactattcgtactggcctccaaggac
ggctgggtcaacatcatgtaccacggcctggatgctgtggctgtggaccagcagccggtg
accaacaacaacccctggatgctgctctacttcatctccttcctcctcatcgtcagcttc
ttcgtcctcaacatgtttgtgggcgtggtggtggagaacttccacaagtgccggcagcac
caggaggtggaggaggccaagaggcgtgaggagaagcggcagcggcgcatggaaaagaag
aggagaaaagcccaaaagatgccctactacgccagctacggccacgtgcgctcaatgatc
cacacgctgtgcaccaaccactacctggacctcatcatcaccttcatcatcgccattaat
gtcatcaccatgtccttagagcacttcaaccagcctcattccctggatctcgtcctcaag
tactgcaactattttttcacctccacgttcgtgctggaatccatactcaaactcatcgcc
ttcggtttccgacgcttcttcaaagacaggtggaaccagctggacctggccatcgtgctc
ctgtccgtgatgggcatcaccctggaggagattgagatcagcgccgccctccccatcaac
cccaccatcattcggattatgagggtgctgagaatcgcccgagtgttgaagctcctgaag
atggcgacggggatgcgagccctgctggatacggtggttcaagccctgcctcaggtgggt
aacctgggcctgctctttatgctgctgttcttcatctacgccgccttaggagtggaactc
ttcggagaactcgtttgcaacgctgactacccctgtgagggtatgagtcgtcacgccacc
ttcgaaaacttcggcatggccttcctaaccttgtttcaagtctccacgggcgacaactgg
aacggcatcatgaaggatacgttgcgcgagtgcccacccgaccacaacaccgaggtggac
tataactgcaacccaagcctccagttcatctcgcccatgtacttcgtttccttcgtgctc
acggcgcagtttgtcctcatcaacgtggtggtggcggtgctgatgaagcacctcgacgac
tccaacaaggaggcccaggaggaggcggagatggatgcagagattgagctggagctggcc
cagggcaccctctgttgcatgggcgcccccggctgcgggggtgcgagggcggacaaaggc
gccgggggcgcggcggccatggcggagaggggagtttccagaagagagaagggcgacgga
gtgagggcgagtcagcggccaacagccccgccgcagccgggagtgtactcgccgtcacaa
gagagtcagtggctggacagtgtgtccctcctgatccaggacacgctggagggggagatg
ctgatgatcgacaacctctccggctctgttttccaccactactcgtctccgcccatctgc
aaagactgcaagggccacctgcaagagatcaggatggcagagattgagcaggcatcgctg
aggtcagagcagctatcagacaagtcctcttcccccgccctgccggacgacctcagtctg
gacgaacataccgcctttcggctgctaacgcaagaggccacggaaagatgcagcagtgac
tcccacggctctgcagatgctggaggtgtaggaggtcaccagactcagactgtggtccag
acacaggtgcaggggtcacacccaccctgccctgccatcagccccggcgtcgagataaag
agtgccctgcaggaactggagaagcactcccatcacttacgtttgtattcacctcactgt
agccctgagttcttccaccctgcacgtgctgcaatccccgcacccccccgcagtaggagc
ctgcggttgacacggggtctgagactaacctctccagcttcctgggcttcgctacagtcc
ccaggagctcatagcaaaatgctgtgtacacagttcccgtcccatagtgactcatcgctt
gcaactggcagctctgagggcagtctgcagaccaccttggaagaaggactcagcttcagt
gtctccccaccacagaacctgcaatttcctttgcccgcagttccattaccacttgtgtgc
cctctgcagctaccggaggacagcacaaccttttcctcgccagtacagatccttaggccc
aggctcaacccttcatcttcccgtaccctccgagccaccataggtcaccagcgcagccag
agcagtggccgaggaagcaccagcccggggtacacccgcgatgactctattgacccatca
gacgaggatctgggcatagtcatcggatcgtcaattggaggttgtggatctagtcaagca
ggcaatagtgaacacttgtcagagacgatgagcagcttatcgttgacatcactgttgtca
ccaaactccctggtgtcttcaggaagtgcagtaaagaagtgcaacagcacaggtagcctg
gaacaaggcggaatgctgctggcatcccggggaagggagggccgccgggagattctaggc
ctaaaacttagagactcccaaggtttcttggccaatccttggacggggatacacacggat
gcaagaagaggaaagggaagaggagaattgggagatggggggaaaggatgggctaagagc
tcgagccaaaccacattagggccttgtcgagagaatagatga
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