Takifugu rubripes (torafugu): 115250777
Help
Entry
115250777 CDS
T02386
Symbol
rp1l1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tru03037
]
115250777 (rp1l1)
04812 Cytoskeleton proteins [BR:
tru04812
]
115250777 (rp1l1)
Cilium and associated proteins [BR:
tru03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115250777 (rp1l1)
Cytoskeleton proteins [BR:
tru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
115250777 (rp1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
115250777
NCBI-ProteinID:
XP_029696697
LinkDB
All DBs
Position
8:4835002..4848694
Genome browser
AA seq
2410 aa
AA seq
DB search
MSLDQAGMWDPQPTSKHASPLPQPPYINPRNSHLTTAAPAKRITFYKSGDSKFGGIRMAV
HKRSFKCFDALLDDLSQKMPLPFGVRTVTTPRGIHTIKHLEQLQDGGCYLCSDQRQAKPI
NMELASKRPNIWHHYSQRPYPPETTPSTPNGHLPYRQRRILLVKNREPSVRRSVVLSRSS
ARSLKAFLDEASEVMQFHIRKLYTAEGRRINNVQNLMTCPGVLVCVGRESFSPLLVNFTR
KTSEDKLPSLGSRSSGLDPRTPGNGARSPATQGARSPIHGAQSRASEYSDGHESKKNVNF
GLETKKSIIHPRSDSSNRSTRFSLSSEKSYSQSKPGIMNDDIEKRVVVNKDGSLSVEMRV
RFRLQNDETLRWSTEIKKSPSLTNECCPLSQAQPHYLQHGQSESCSDPDSTSFDRECLDY
SSQHPHHIIEGNQCPCCYQRQKPQYDLWENPAHINNQHPVPPPYSAGHTHTIVRHTHSSS
SSSSCNSRRVVRCRARLSKCAEGSGLEPSQLIQEEMCVTEQVERTVEVEQNGDTHVEVCR
VSHCSEVVALDSNLQSVSGKSGEARLMMEDEENHPMSAVSSSSHVLQLLKEDQDDDLPPS
VSQCSCRNEPSPSSETASFHSCQNKHNNEAEREWQAGSNTSFSHCRVATPHSTEESEEMH
ETQRLNPTISRASCRSSKAEAAASEVVADDEDEEIMRVVSGLSGHTDGSLQSSFCPHCGG
FKRPVNRVLNSRSSKRSHQSQNTSSPLPNQEHDDDDEDDDDDASNVSGVSTKSNKTNLSN
HGCLSTSNVTQSRACSVTSNLSNTETKDEERSSVRGHKCKIPHRSGASGHSDDKIWERNP
SPMSAQSRKSRTSNYNAATDVMAKEEDLGNTERAMGSVSAKTGASSKTPSVKLCINDASQ
YDSTTMEEGTTDKRTTSPFDMTGKMERPDSVASAKSTKSNVSIKTNQSHRSICNKYATAV
SPCADEAAADKLQGEGSGTEERAASTNSHQSSKASQRSFSPSAKPEDNNRSMSKMSGQSV
KSKASVKSSKSCKSNYNGNETVTSLKPTEREQNEDGAIEVKTPQAESAAYSTKSNENPES
TSESKDIPGNDDVQEKAEITSMEERAHSAMSGNSHSSAMSSCPQKSNCSARLDPKNEDGL
ERAHSAMSAKSKSSARSSHKSSSGGKIPASSALSHKSSHNGTADVEETAVSGNCISDHSR
DQSVSPKSIRSPKINSPKVSPTPSGSPQSPVQQLLPDPSVSETRGLSALSVHSVKSAKSR
RSKCSCGAASSTKEVDLEDKDVKSEELAGQPSSILSPSTKRLRKESGGTEEPLSRNSSGS
ISIGLPEDTDSSDSWKSSVSGRNRAKTRSPDVAAKEDVERLSVISQKSNFNESKSAHDLP
IINIATIKSPGQESGEQNRVKESNPATSKGTGSRSSKSGSSRSASRPKSSHVDELDNGAL
STASSASAQIKHVAKTPKGDYVENIRRPISKAKKKEDIENDNATSVTSKSPCCLSPDVAP
PLATSNGSGKSLSSKRKEASIKAQSPCPAPNTSPAEKLETCSESTLSQSLSAADMLKETV
AAARPSSHQSKTSKTSNKPRSEKNRENKIALVDLELTPTCLPNASPNEVVSEWLKGIPAD
SSILDFSDDLHVVEEHEKVEDNPVEEAEDEGLKENTVDEEEKSNHLEEEEENEEEECKDE
GAAGDAVVTSQPKAPLMCNDSVPRNWQSSAAVMKVLLSSSLGRCQSLPEVSPVYGRRLST
SAKGFLDCLAQLQLIEPAVHPCCDQSTGHRYEDIMTILQSLWLIEPRDIEAKEDKDNRTD
QVTPPRSSSGVDMSSGSGGSGKEMVNPGGDEAEQNHRSDAVDTREDEHDVNTDQNTLPAS
LDSPKATENPSIEKSSPNDSSKSPTDNERETPEETSTGSPPAVLQTLTKKPSQEPDPVWI
LKLLRKLEKQFMNHYVNAMAEFKVRWDLDDSVILNTMITELKDEVSQRIQSSIAREIKKI
QSRAGRMEQSAYLPREPNLSRDSSMIEKRRRMMRVMKNQSVKTADSFTDEEMMGDFSDQR
SEDEYCPCDACVRKKMASRPLKINQAAAEAPVMMEFDLLKILQLKKSPLPSDTAAREEEV
KEVVVKEEGRSLEVVQEEEEEVEETKEDIKADVLLEETILEEDEEVEDGSPSEEEEVVAE
VDKAECECVKEEEENVQEGEEETSNNGGEGESADDEEESEHETIKEAARDETANDEEEVA
EDLDEERGESAGRESTGDEDIENKEVKSKEDSEGATSEARDEEDNPREEESHDTEKGGGS
DEREALEETDASQGLESSQPEEAADTVHSCDSNGDESGEVQKADDEDPEETQEEVNSKKG
DGALQHQFTRTSVESQPGSLEDVDLPPNIVSSIEVPKTGAGGGGSAGQRRSRSPARVKRR
KPKECDEEDF
NT seq
7233 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggaccaggccggaatgtgggacccccagccgacatctaaacatgcctcgccc
ctcccccagcccccctacattaacccacgcaactcacacttgaccacagccgccccggcc
aagcggatcaccttctacaaaagcggcgacagcaagttcgggggcatcaggatggcagtc
cacaaacgcagcttcaaatgcttcgatgccctgttggatgacctttcccaaaagatgccg
ctgccattcggtgtgcgcactgtgaccactccccgcggcatccacaccatcaaacatctg
gagcagctccaggatggtggctgctacctctgctctgaccagaggcaagctaagccgatc
aacatggagctggccagcaaaaggccaaacatctggcaccactacagtcagaggccctat
ccgcctgagaccacaccctccacgccgaatggccacttgccttacaggcagcgccggatt
ctgctggtaaagaacagggagcccagtgtgaggaggagcgtggtgctcagcaggagttca
gccaggagcctgaaggcctttctggatgaggcgtcagaggtgatgcagttccatatccgc
aagctctacactgcagagggccgccggatcaacaatgtacaaaacctgatgacctgtccc
ggggtgttagtgtgtgttgggcgggaatcctttagtccactgctggtgaacttcacaagg
aaaacctcagaagataaacttcccagtctaggaagcaggtcttcaggtcttgacccaagg
acccctggtaatggggcgcgatctcctgctacgcaaggagccagatcacccattcatgga
gctcagtccagagccagtgaatacagcgatggacacgaaagcaagaaaaatgtaaatttt
ggattggaaaccaaaaaaagcatcatccatcctcgatcagactcctcaaacaggtccact
cgtttctccttgtcttcagaaaaatcctactctcagtcgaaacccgggattatgaacgat
gacattgaaaagcgtgttgtggtcaataaagatggtagcctctcagtagagatgagggtg
cgatttcgcctgcagaatgatgagacccttcggtggtccacagaaattaaaaaatctccc
tctttgaccaatgagtgttgccccctgagccaggcccagccccattacttgcagcatggt
cagtcagagagttgctctgaccctgattccacatcatttgaccgagaatgtttggattat
tccagccaacatcctcaccatattatagaagggaaccaatgcccctgctgctaccagaga
cagaaaccacagtatgacttgtgggaaaacccagcacacatcaataatcagcatcctgtt
cctcctccatattcagctggacacacccacactatagtgaggcacacccactcttctagt
tcttcctcatcttgcaactcgagaagagtggtgcgctgtcgagcacggctttccaaatgt
gcagaaggctcaggtttggagccgagtcagctgatccaagaggagatgtgtgtgacagag
caggttgagcgcacagttgaagtggagcagaatggagacactcatgttgaggtgtgcagg
gtaagccactgcagtgaagttgtcgcattggatagcaacttacaatcagtcagtgggaag
tcaggagaggctaggctgatgatggaagacgaggagaatcatccaatgtctgcagtcagt
agctcctcacatgtcctgcaattacttaaagaggaccaggatgatgaccttccacccagt
gtttcgcaatgctcctgcagaaatgagccatccccatcatctgaaactgcttctttccac
tcctgccaaaacaaacataacaatgaggcagaaagagaatggcaggcaggatccaacact
tctttcagtcattgcagagtggctactccacattccactgaagaaagcgaggagatgcat
gaaactcagaggctaaatcccacaatcagcagagcctcttgtagatccagcaaagctgaa
gctgcagcctcagaggtagtcgcagatgacgaggatgaagaaataatgagggtggttagt
ggcttatctggtcacacagatggttctctgcagtccagtttctgccctcactgtggaggc
tttaaacgtcctgtcaaccgtgttctcaacagtagatcatcaaagaggtcccatcaatct
cagaatacttcatcacctctgcccaaccaagagcatgatgatgatgatgaagatgatgat
gatgatgcctcaaatgtatcaggtgtgtcaacaaaatccaataagaccaacctcagcaac
catggctgcctctcaacttcaaatgtcacacagagtagggcatgtagtgtcacatccaac
ctgtcaaatactgagacaaaagatgaagaaaggtcctcagtaaggggtcacaaatgcaag
ataccacacaggtctggagccagtggacattcagatgataagatctgggaaagaaaccct
agtcccatgtccgctcagtccagaaagtctcgtacctccaactacaatgctgcaacagat
gtgatggcaaaagaggaagatcttggaaatactgaaagagcgatgggctctgtgtcagcc
aaaacaggagcttcatccaaaactccatcagtcaaattatgtattaatgatgcctctcaa
tatgatagtacaactatggaagagggcactacagataaaagaaccaccagtccttttgac
atgactggtaaaatggaaaggcctgatagtgttgcatctgctaaatccactaaatcaaat
gtgtcaattaaaaccaaccaatctcacaggtcaatctgtaataagtatgcaacagcagta
tctccatgtgccgatgaagctgctgctgataaactacagggggaaggtagtggaacagag
gaaagagcagcaagtaccaattcccatcaatctagcaaagcttcacaaagatcattttct
ccaagtgcaaaacctgaagacaataacagatcaatgagtaaaatgtcagggcaatctgtt
aaatctaaagcttctgttaagtcctcaaagtcatgcaaatcaaactataatggcaatgaa
actgtaacatctttaaaaccaacggagagggaacaaaacgaagatggagcaatagaagtg
aaaacaccccaagcagaaagtgctgcatacagtactaaatctaatgagaacccagaatct
acatcagaaagtaaagacataccgggaaatgatgatgtccaagaaaaagcagaaattaca
agcatggaagagagagcccatagtgccatgtcaggaaactcacacagtagtgctatgtct
tcctgcccccaaaagtcaaactgttcagcacgcctagatcccaaaaatgaagatgggctt
gaacgggcacacagtgccatgtctgcaaagtcaaaatcatctgcaagatcctcacataaa
tcaagttctggtggaaaaattcctgcttcatctgctttgtctcataaatccagtcataat
ggaacagccgatgtagaggaaacagctgtgtcgggcaattgtatttctgaccattctcgt
gaccaatcggtgtcacccaaaagtatacgttccccaaagattaattcaccaaaagtttca
cccacaccatccggcagtccacaatcccctgtgcaacagttgctgcctgacccaagtgtt
agtgaaacaagagggctcagtgccttgtcggttcactctgtaaagtctgcaaaatctaga
agatccaaatgcagttgtggagctgcttcttcaacaaaggaagtggatctggaggacaag
gatgtgaaaagtgaggagttagctgggcaaccttccagcatcctgtccccctcaaccaaa
agactgaggaaggagtcaggaggcacggaggaaccactgagtcgaaattcttcagggtca
atctctattggactgcctgaagacacagacagttcagacagttggaaatccagtgtttct
ggaagaaacagagcaaaaacaagaagccccgatgtagctgcgaaggaagatgtggaaaga
ttatctgtcatttcacaaaagtccaattttaatgaaagcaaaagcgctcatgacctccca
atcataaatatagccaccattaaatcaccaggtcaggaaagtggagagcaaaatcgagta
aaagaaagcaatccagctacaagcaaaggcaccgggtctcgcagtagtaaatcagggagt
tctaggtctgcatcgaggccaaaaagtagtcatgtagatgaactggacaatggggccttg
tctactgcatcctctgcaagtgctcaaataaaacatgttgcaaaaacacccaaaggagat
tatgtggaaaatatcaggagaccaataagtaaagccaaaaagaaagaagatattgagaat
gacaatgcaacaagcgtaacctccaagagtccctgttgcctcagtccagatgtcgcacca
cctttggccacctccaatggaagtgggaaatcactcagctctaaaaggaaggaagcatca
ataaaagctcaaagtccctgtcctgcaccgaataccagtcccgctgaaaaattggagacg
tgtagtgagagcactctatcgcaatctctgtcagcggcagacatgctgaaggaaactgtg
gctgctgcacgtccatccagccatcagtccaaaaccagcaaaactagtaacaagccgagg
agtgaaaaaaatcgggaaaacaagatagctcttgtagatcttgaactgacaccaacctgt
cttcccaatgcatcccccaacgaggtggtcagtgagtggctgaaaggcattcctgctgac
agcagcatccttgactttagtgacgacctgcatgtggtagaagagcatgaaaaggtggaa
gacaaccctgttgaagaggcagaagatgagggtcttaaagagaatacagtggatgaggag
gagaaatccaaccatttggaggaagaggaggagaatgaagaggaagagtgtaaagatgag
ggtgcagcaggagatgctgtagttacttctcagcccaaagctccgttgatgtgtaatgat
tcagtacccaggaactggcagtcctctgctgctgtcatgaaagtactgctgagctcctct
ttgggaagatgtcagagcttaccagaggtgtccccagtttacggtcgtaggcttagcacc
tcagctaaagggttcttggactgtttggcccagctccagctgattgagccagcagtgcat
ccatgctgtgaccagtcgacaggccatcggtatgaggacataatgaccatccttcagtcc
ctctggctcattgaacccagagacattgaagccaaagaggacaaagacaacagaaccgac
caggtgactccaccgaggtcttcatctggagtggatatgagcagcgggtctggcggatca
gggaaagagatggttaacccaggtggcgatgaagcagaacagaaccatagaagtgatgcg
gtagacacacgtgaagatgagcatgacgtaaatacagatcaaaatactctccctgccagt
ctggacagtccaaaagctactgaaaatccctcaattgaaaaatcctcccccaacgacagt
tccaaatcccccactgataatgaaagagagacgccagaggaaaccagtacgggctcaccc
ccagctgtgctgcaaacgctgacaaaaaagccatcccaggagcccgatccagtttggatt
ttgaaactgcttagaaaactagagaaacagttcatgaaccattacgtcaatgccatggca
gagttcaaggtccgctgggacctggacgacagtgttatcctgaacaccatgatcactgag
ctgaaggacgaggttagccaacgcatccagagcagcatcgctcgtgaaataaagaagatt
caaagtcgggccggcagaatggaacagtcagcttatctgccaagagaaccaaatctttcc
agggattcttccatgatagagaaaagacgtcgtatgatgagggtcatgaagaaccagtca
gtcaaaactgctgactccttcaccgatgaagagatgatgggcgacttcagcgaccagcgg
agtgaagacgaatactgtccctgtgatgcttgtgtccgcaaaaaaatggcttcccggccg
ttgaaaataaaccaagctgccgcagaagcaccggtgatgatggagtttgacctcttaaag
attctccaattaaagaaaagcccattgccttcagacactgcagcaagggaggaggaggtt
aaggaagtggtcgtaaaggaggaggggaggagtttagaggtagtccaggaagaagaggaa
gaggtggaggaaaccaaagaagatatcaaagctgatgtgctattagaggagacgatcctg
gaggaagatgaagaggtagaagatgggagtccgtcagaagaggaggaggtggtggctgag
gttgataaggcagaatgtgaatgtgtaaaagaagaggaggagaatgtgcaggagggagag
gaggaaacaagcaataatggaggtgagggtgagtcagcagatgatgaagaggagagcgaa
cacgagacaataaaagaggcagcaagagatgagacagccaacgatgaagaagaggtggca
gaggacttggatgaggagagaggagaatcggccggcagggaaagtacaggggatgaagat
atagagaataaggaggtaaagagtaaagaggactcagagggtgccacttctgaagcacgg
gatgaagaggataaccctagagaggaagagtcacatgacacagaaaagggaggaggaagt
gatgaaagagaagcattggaagaaacagatgcatcacaggggctggagtcgtcacagcca
gaggaggctgctgacaccgtgcactcatgtgacagtaatggtgacgaatcaggggaggtg
cagaaagcagatgatgaagatccagaggaaacacaggaagaggtcaacagtaaaaaaggg
gatggtgcccttcagcatcagttcaccaggacctctgtggagtcccagcctgggtccctg
gaggatgttgatctgcccccaaacatagtgagttccatagaagtgcccaaaacaggagcc
ggtggtggtggcagcgcgggtcaaaggaggagtcggtcgccagccagggtcaaacgtcgc
aaacccaaagagtgtgatgaggaggacttttaa
DBGET
integrated database retrieval system
