Takifugu rubripes (torafugu): 115251000
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Entry
115251000 CDS
T02386
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115251000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
115251000
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115251000
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115251000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
115251000
NCBI-ProteinID:
XP_029697432
LinkDB
All DBs
Position
9:8925398..8930864
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AA seq
519 aa
AA seq
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MFGARKKFVEFVEVVDNDFPDENMYYNQPSMFPHRSDKDILSSPSPSSSSQLSQLGASLY
APQSALGFSVRGMGNNTPQLNRNLTQGTQLPSHITPTTGVPTMSLHTPPSPSRGTLPMNS
RNMLNHSQVGQGIGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGM
NRNQVFGMNNSIFNGTDGSENITGLDLSDFPALADRSRREGTGNPTPVLNPLAGRAPYVG
MVTKPSAEQTQDFSIHNEDFPALPGPNYKDTTLNNDESKTNLNSTSKSTSSADGPKFPGD
KTASAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSD
LTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLARYGE
DLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTYYF
FDCHNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttgtagagttcgttgaggtagtcgacaacgactttcct
gatgaaaacatgtactacaaccagccgtcgatgttcccacatcggtcggacaaagacatc
ctttcatctccctcgccgtcgtcgtcaagtcagctgtcacagcttggtgcaagtttgtat
gctccacaaagtgcacttggcttctcggtgaggggcatgggaaacaatacaccacagctt
aaccgaaatctaactcaaggcacgcagctaccaagtcatatcacccctacaacgggggtc
cccaccatgtccctccatactcctccatctccaagcagggggacgttgccgatgaattcg
aggaacatgctgaatcactctcaggtcggtcaaggcatcgggatgagcggcaggaccaac
agtatgggcagctcggggttgggcagtcccaaccgcagctcgcccagtatcatctgtatg
cctaaacagcaaccagcacgccagcccttcactataaacagcatgtcggggtttggtatg
aaccgcaatcaggtttttgggatgaacaacagcatctttaatggtacagatgggagtgaa
aatataacgggactggatctgtcagacttccccgcattagcagacaggagccgacgagaa
gggactggaaacccaacaccagtgctcaacccgctggctggccgagctccttacgtcggc
atggtgacaaaaccgtcggctgaacagacacaagatttctccatccacaacgaggatttc
cctgcactgcccggccccaattacaaggacaccacactgaacaacgacgaaagcaaaact
aacttgaactccacaagcaagagcacgtccagcgcagacgggcccaagttccccggagac
aaaactgcctcagcacagaacaacaaccagaagaaagggatccaggtgttgcctgatggc
cgggtgacgaacattccgtctgggatggtaacggaccagttcggcatgattggcctgctg
acgtttatccgggcagcagagacggatccagggatggtgcatttggctctggggagcgac
ctcacgacactgggactcaacctgaactctccagaaaacctgtaccccaagttcgcctcg
ccgtgggcgtcctcaccctgtcggcctcaagacatcgacttccacgttccctccgaatat
ttaaccaacatccacatacgggacaagttggcagcgatcaaactggctcgatatggagaa
gacctgctgttctacctgtattacatgaatggaggagacctgctacaactgctggcagca
gtagagctctttaaccgggactggaggtatcacaaagaggagcgagtttggataacgagg
gcgcccggcatggagcctacactgaaaaccaacacatacgagaggggaacgtactacttc
tttgattgtcataactggaggaaagtagccaaggaatttcatctggagtatgacaagctg
gaggagaggccacacgtgccaacaacatttaactacaacccagcccagcaggccttctaa
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