Takifugu rubripes (torafugu): 115252428
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Entry
115252428 CDS
T02386
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
115252428
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tru01009
]
115252428
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tru04515
]
115252428
Protein phosphatases and associated proteins [BR:
tru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115252428
Cell adhesion molecules [BR:
tru04515
]
Cadherins
Protocadherins
115252428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
115252428
NCBI-ProteinID:
XP_029703485
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Position
14:complement(7754950..7758771)
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AA seq
859 aa
AA seq
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MGHGIPHNMNQAGLLQNLLIVIHLQHIICDSIGFSIPEEQEPSTLVGSLNRLLPPPYQLL
SPEFLWMDKNTGDFYTTEKKLDREALCPEETKAEQCIILLTAVVGPSGDLLQFPVIIEDI
NDNVPHFENSKIHLWVSEDVTVGTSLLLDVQAQDKDAGRNGEVHYRLEDPDGVFGLTFLG
DGPVVALVVQTAIDRETRDFYEIKLEAIDRGSDPLSATATLIVTVTDVDDNCPSFSPAGP
RSVAIPGDSPRNMLVAQVRAIDPDSGPNAAIIYSLSPKVSERAKKLFSLDSLTGDIRLAQ
DLQSDNSEELLLKVLASSQHCPPADTLVTVSILPEAYRELTIKIGFIGEHQRGTMVLPEN
QPPTALAILELQGDNSFISSSLAIENKVPFSLSPQNGKYLLSTSKPLDHEMKRDYNISVV
AQGTSADGSAVAPSRHIYRVMVADVNDNAPIFPESHYQLEAQENNRPGMTLLRVSAWDVD
DGHNGRVTYRLGNHTPTVFSIDPVTGQLSASASLDREQQGAHVITVFARDSGSPPLESVA
TVSIRVLDQNDNAPVFVTPHFIFFVPEDAPLLAEVGAVSVTDPDEGENGDTEMFLKNSSG
PFVVDRTKGILHITTHLDRETEQRYELYLLARDRGYPSALTSTARVTIFVEDVNDNPPRV
ILPSSNSSCLTVPTGTIAGTVVTRIYAMDEDSGLNSEITYTLVASKPAQSTGPFKVDSRS
GNITITERLLQKDLGMHHLFIVVRDGGKPAPLYTTVWIHLLVNDSTEPCLLTRAPTLTGT
LDFVLNPSKAPICEAEDIKYPQLMLLAGLGMMLASTCLFVATAVLYLKCKRGSSQRNKTG
CTDEKEIPLSLKSRYHFDD
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgggattcctcataatatgaaccaagctggattactgcagaacctgctgatt
gttatccatctccagcacatcatatgcgattctattgggttttccatcccagaagagcag
gagcctagcactctggtagggtcactcaatagactccttccacctccgtaccagctcctg
tctccagagtttctgtggatggacaaaaacacgggcgacttctacaccactgagaaaaag
ctggaccgggaagctctctgccccgaggagacaaaagctgagcagtgcattattctgctc
actgctgttgtgggaccctcaggagaccttttacagtttcctgtgatcatagaagacatc
aatgacaatgtgcctcattttgaaaacagcaaaatacacctctgggtgtctgaggatgta
acagtggggaccagtttattattagacgtccaggctcaggacaaagatgctggtcgtaat
ggcgaggtgcattaccgcctcgaagaccctgatggagttttcggtttaacattcctgggc
gacgggcctgtcgtcgcgctggttgtgcaaacagcgatagacagagagactcgggatttc
tacgaaataaagctggaggccatcgaccgcggctcagaccctttgagcgctacggcaact
ttgatagtcacagtgacagatgttgacgacaactgtccaagcttcagccctgccggcccc
cgcagtgtcgctatccccggagactccccgaggaacatgttggtggctcaggtcagagcc
atagacccagattcaggccctaatgctgccatcatttactccctcagtcccaaagtctct
gagcgggccaagaagctgtttagccttgacagcctcactggagacatcagactagcacag
gacctccagagtgacaactcagaggagcttctattgaaagtgttagccagtagccagcac
tgccccccagcagacactctagtaaccgtatccatcctccccgaggcctaccgagagctg
acgattaagattggattcataggtgaacatcaaagggggactatggtgttaccagagaac
cagccccccaccgccttagccattttagagctgcagggtgacaacagctttataagctca
tcgcttgccattgagaacaaagtgcctttcagtttgagccctcagaatggtaaatatctg
ctttccacatcaaagcctctcgaccatgagatgaaaagggactataatatttccgtggta
gcgcagggaacatcagcagacggctctgcagtcgctccttccaggcatatatacagggtg
atggtggcagatgtcaatgataacgccccaattttcccagagtcccactatcagcttgag
gcgcaggaaaacaaccgtccagggatgacgctgttgcgcgtctcagcctgggacgttgac
gatggacacaacgggagggtgacctacagactgggtaatcacacacccacagtgttcagc
attgaccctgtgacaggtcaactgtctgcatcagcctctctggatagagagcagcagggt
gcgcacgtgatcaccgtgtttgcacgagacagtggctctcctcctctagagtcagtggct
acggtgtccatccgagttctggaccagaatgacaacgcgcctgtttttgtgacgcctcac
ttcatctttttcgtccctgaagatgcgcctctgctcgctgaggtgggggccgtaagtgtg
acggacccggatgagggagagaacggagacacggagatgttccttaaaaacagcagcggg
cctttcgttgtggatcgcaccaaggggattcttcacattacaacgcatttggaccgcgag
acagagcagcgctatgaactgtacctgctggcgcgcgatcgtgggtatccaagtgctctg
acttccaccgcgagggtgaccatcttcgtggaagacgtcaacgacaacccaccaagagtg
atccttcctagcagcaactcttcctgcctgactgtcccaacaggtacaatcgcgggcacc
gtggtgacgagaatctatgccatggacgaggactcgggtttaaattccgagatcacgtac
accttggtggcttcgaaacctgcgcaaagcaccggtcccttcaaagtggattcgaggtca
gggaacatcacaataactgagcgacttctacagaaggatttgggaatgcatcatctgttc
attgtggttagagacggaggaaagccggctccgctgtatacgaccgtctggattcatctt
ttagtcaatgacagcacggagccttgcctcttgaccagagcgcccaccttgacagggaca
cttgactttgtcctaaacccctcaaaggcccccatctgtgaggcggaggacatcaaatat
cctcagctgatgctcttagccggccttggaatgatgctcgcatccacgtgcttgtttgtg
gccacagctgttttatatctgaaatgcaagagagggagctcacagcgaaacaagactggg
tgcacagatgagaaggaaattccactcagcctcaaaagccgatatcactttgatgactaa
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