Takifugu rubripes (torafugu): 115253079
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Entry
115253079 CDS
T02386
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-2-like
KO
K05637
laminin, alpha 1/2
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04510
Focal adhesion
tru04512
ECM-receptor interaction
tru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115253079
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115253079
09142 Cell motility
04820 Cytoskeleton in muscle cells
115253079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
Laminin_N
Laminin_I
EGF_LMN_ATRN
Laminin_II
Laminin_G_1
Laminin_G_2
DUF1231
DUF948
Motif
Other DBs
NCBI-GeneID:
115253079
NCBI-ProteinID:
XP_029705873
LinkDB
All DBs
Position
16:complement(10885931..10964470)
Genome browser
AA seq
2373 aa
AA seq
DB search
MQRLRFVLLTAVLCHWCQGQQRGLFPAVLNLASMAEISANATCGSLGPEMFCKLVEHVPG
QPVRNPQCRICNQRSVKPFEKHPIEYAIDGTNQWWQSPSIKNGKEYHYVTIMLDLKQVFQ
IAYVIVKAANSPRPGNWILERSLDGVTFEPWQYYAITDTECLTRFNITPRTGPPSYTRDD
EVICTSFYSKIPPLENGEIHTSLINGRPSADDPSPKLLNFTSARFIRLVFQRIRTLNADL
MTLTLSDPRDIDPIVTRRYYYSIKDISVGGMCICYGHAKACPLNPVTKKFTCECEHNTCG
ESCDRCCPGYHQQAWMAGTFHTRHICEKCNCHGKAEECYFDQRVADLSLSLDIRGQRRGG
GVCVGCSDYTAGTNCETCIPGFYRPVGVSADEENPCIPCSCDSDGSVKQSCVPDSDQATP
SQPPGSCWCKEGFGGLRCDRCAVGYMGFPFCQRCNCSIDGSTNEDPCVTPCVCKENVEGE
NCDRCKLGFYNLHRANQRGCGKCSCMGVSSLCSASTWTYQNESTLTGWHLVGLSGRTVWS
VHRQTPPYLSVRNADVVTDLGSSYYWNAPGSYLGNKLTAYGGNLAYTVSYNTDQQEQSVI
RVTSEPDLIIEGGGLKIMDGRFGQPVYPFSPSTNRIKLLPENFLDAGSAQPISRRDFLRV
LANLTSMMVRASYSTEPSAVYRLHSFSMQIADASLQGDQRASAVEFCSCPAGYAGTSCEA
CIPGFRRVNGNLYNGVCEACHCHGHASHCDEVTGHCLDCIHHTTGPHCDTCLPGYYGNTT
HGSPADCQLCTCPLSLPSNSFSPTCHLSKGGELLCDQCEPGYTGPRCDRCYNGYFGQPSV
PGGSCQPCHCHGNLDLSTPDSCDPVTGRCLRCRQGYGGADCDSCAEGYYGDATAARNCQP
CQCHTNGSLSEICSQETGQCQCKENVIGRKCDTCLSQTHGLNTRGVCAPCHCNSFGSKSF
DCDEMGQCRCQPGVTGPKCDRCARGFFNFQEGGCTPCECSHVGNNCDTNTGQCICPPNTI
GERCDRCAPNHWGHDIVTGCKECGCSAIGSVSQQCNVNTGCCSCRDTYRGEKCNECRIGF
RDFPQCTQCECHFSGSDSQTCDPETQVCACADRTGKCSCKTNVEGHSCGACKPSTFGLSV
KNPLGCSRCYCYGLTLSCSEAPGLIRMWLTLKPEQTVLPLVDRSNTVETRRGVSFQHPEI
LVHADLVDPALTEPYYWKLPGQFKGSMITAYGGQLKYAVYYEARDETGPSSYEPQIIIKG
GXPSHNILMTRHVPGLQIGQLTRHEIDMTEHEWRYADGRSMTREDFMDILFYVDYILIKA
SHGNLMRHSRISEISLTVAEEGRPSKDSEKAHQIEKCDCPIGYSGLSCEECAAGFYRLRA
GWLASAPASKVPTAAGMGSCVQCQCSGHSSTCDPETSICQSCRDNTEGDRCERCAPGFYG
VVRGFRDDCKPCACPLTNPENNFSPTCAAEGFEDYRCTACPEGHEGKYCERCATGYHGDP
KSPGGRCEECKCSAWGALPGPCDPVTGQCRCRVGATGPSCDQCMERHVCGPTGIISCDDE
CSGLLISDMDRLYRIIADVTLTTPLPPPYKLLYRFENMTEELKHMLSPQRAPERLLQLAD
SNLESLVIEMDQLHSRATKVSADGEQVEDDAARIHKRAEELEQFVRDTLLRATDLQLKAA
EVNKTLSRNDGSPDKSLKVMKEDIQAMLAEMRKRQLAGQKXIAEDELQLAAELYQNVQRL
FGDPHQSTEDLKVEIKEKLADHGGKLQEAQDLLHSARGNTRQAGSLAEQNQANLATLERK
RSAVSKVKQEAQEVLEQGEHLLAEANQLSDNINKEVEEAEEMEKGLSPLGDQLEERVRHL
ADGLGNGRLANRVLEAEEHAQQLNDSAAILDSILTDAKSVSLNATAAFKAYSNIKANIDA
AEKEAKAAKQRASEALDLALGPEVPVSEEAQSALQKSHKLLNQAQQLGSDVKGTDESVMR
LKGRVKAARDRTKDLLRAVNGTMETLITIPNDTAARLAATKAVAADANSTAIDVLERLGE
LNLHLRGLQRNYSELEDTVKAANQMIQDPEKNTIIHAAGAKVKDLEDEADRLLEKLQPIR
KLQDNLRRNISQIKELINQARKQANSIKVSVSSGGDCLRSTRPDIRKGRYNTITLHVKTT
TTDNLLLYLGSAKFIDFLALEMRKGKVNFLWDVGSXVGRVEYSHHTIHDGNWHRIEASRN
GLNGTISVYPLEGSMAGMMPTPASANSPSAYTILDVDQNAYLFXGGIFGKVKKAEVVRTS
TFTGCMGETFLDGKPIGLWNYRQRQGDCKGCVVSPQRSDGEGTVQLDGEGYAAVGRPTRW
NPNISTVAFKFRTFSSDSLLMYLATEDMVGMQS
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcctccggttcgtccttctgaccgcggtgctgtgtcactggtgccagggccag
cagagaggactcttcccagctgtgttgaacctggcgtccatggcagaaatctcagccaac
gctacctgtgggtcgctgggcccagagatgttctgtaaactggtagagcacgttccgggc
cagcctgtcagaaaccctcagtgtcgaatctgcaaccaaaggagtgtgaagccatttgag
aaacatcctattgaatatgctatagatgggaccaaccaatggtggcaaagcccttccatc
aagaatggaaaggagtaccactatgtgactataatgctggatttaaagcaggttttccaa
atagcctacgtgatagtaaaagcagcaaactcccctcgcccaggtaactggattttggag
cgttcgctagatggcgtgacctttgagccgtggcagtactacgccatcacagacactgaa
tgtctgacgagattcaacatcactccgaggacagggcctccatcttacaccagggatgat
gaagttatctgcacatccttttattcaaagattccccctctggagaatggagagatccac
acgtctttgatcaatggccgaccaagtgcagatgacccctccccaaagctcctgaacttc
acgtctgcacgctttatcagattggtgttccagcgaatcagaacgctgaacgccgacctc
atgactctgacgctcagtgatcccagagatatcgatccgatcgtgacaagacggtactat
tactccattaaggacatctcagtgggaggcatgtgcatctgctacggccacgctaaagcc
tgtccactcaatcctgtcacaaagaagttcacttgtgaatgtgagcacaacacatgtgga
gagagctgcgatcgttgttgccctggttaccaccagcaagcctggatggcagggaccttc
cacactcggcatatctgtgagaagtgtaactgccacggcaaggcagaggagtgctacttt
gaccagagagtggccgatctgtccctcagcttggacatccgtggtcagaggagagggggc
ggagtctgcgtgggctgcagtgattacacagctgggaccaactgtgagacgtgcataccc
gggttctacagacctgttggggtgagcgctgatgaagaaaacccctgcatcccctgctcg
tgtgactctgacggttctgtgaaacagtcgtgtgtcccggactcagatcaggcaacaccg
agccaaccaccggggtcatgctggtgtaaggagggttttgggggtctccgctgcgacagg
tgtgctgttggttatatgggcttcccgttctgccagcgctgtaactgcagcattgacgga
agcaccaacgaggacccctgtgttacaccctgtgtgtgcaaggaaaacgtggagggggaa
aactgtgaccgctgcaaactggggttctacaatctccaccgtgccaaccagcgcggctgt
ggaaagtgctcctgtatgggcgtgtccagcctgtgctctgcctccacatggacctatcaa
aatgagagcaccctgacaggctggcacctggtgggactctcaggaagaacagtgtggtcc
gttcacagacagacacctccttatctgagcgtccgaaacgctgatgtggtgactgacctg
ggctcatcctactactggaacgcaccgggatcctacctgggaaacaagcttacagcctac
ggaggaaacttggcctacactgtttcctataacaccgaccaacaggaacaatcggttatt
cgagtgacctctgaacctgaccttatcatagagggaggagggctcaagataatggatgga
aggtttggccagccagtttacccgttctcaccaagtaccaatcgcatcaagcttcttcca
gagaacttcctggacgcagggagcgcacagccaataagccggagggatttcttgagggtt
ttagccaatctgacgagcatgatggtcagggcgtcttatagcacagagcccagcgccgtt
tacagacttcattcattctccatgcagatagctgacgcctcccttcaaggggaccaaaga
gcttcagctgtagagttctgctcgtgtccagctggatatgctggaacctcctgtgaggcc
tgcattcccggctttcgaagagttaatgggaatctgtataatggcgtgtgtgaagcatgc
cattgtcacggacatgcttcccactgtgacgaggtcacgggacactgcctggactgcatt
caccacaccacaggcccgcactgcgatacctgcctacctggttactatggaaacactact
catggttcacctgcagactgtcagctgtgcacctgcccgctgagcctccccagcaacagc
ttcagccccacctgccacttgagcaaagggggagagctgctgtgcgaccagtgtgagcct
ggatacacgggaccacgatgtgacagatgctacaatggctactttggccagcccagtgtg
ccaggaggctcctgccagccctgccattgccacggtaacctggatttatccacacctgac
agctgtgatccagtgacaggccggtgcctgcgctgccgtcaaggatacggtggcgcagac
tgcgacagttgcgcggaaggttattacggagatgccactgctgcgagaaactgtcaaccg
tgtcagtgtcacactaatggctccctctctgagatctgcagccaggagaccggccagtgt
caatgcaaagaaaatgtgattggaagaaagtgcgatacttgcctgtcccagactcacggc
ctgaacacgcgtggggtgtgtgctccgtgccactgtaactcctttggttccaagtcgttt
gactgcgacgagatgggccagtgtcggtgccagcccggcgtcaccggacccaaatgtgac
cgctgtgctcgaggattcttcaacttccaggagggcggctgcacaccctgtgagtgcagt
catgtgggcaacaactgtgacactaacacaggacagtgtatctgtcctcccaacaccatt
ggtgagcgttgtgatcgatgtgctcccaaccactggggccatgatatcgtcactggatgt
aaggagtgtggctgcagcgcgatcggctccgtgagccagcagtgtaacgtcaacacgggc
tgctgctcctgccgcgacacctacagaggagagaagtgcaacgaatgtcggattggattc
agagactttcctcagtgcacccagtgcgagtgtcacttctcaggatcggacagccagacc
tgcgacccagagacacaagtgtgtgcatgtgctgatcgaacaggaaagtgcagctgcaag
accaacgttgaaggccacagctgtggtgcctgtaagccgagcacctttgggttgtcggtg
aaaaaccccctgggctgcagcaggtgctactgctacggactgacgctgtcgtgctcggag
gctccggggctgatcaggatgtggttgaccctgaagccggagcagacagtgctgccccta
gtggacaggagcaacactgtggagacccggagaggagtgagtttccagcaccctgagatc
ctggttcatgcagatctggtggatcctgctctcactgaaccctattactggaaactgccc
gggcagttcaaaggctccatgatcacagcttatggaggacagttgaaatatgccgtgtac
tacgaggccagagatgaaacgggcccttcgtcctatgagcctcagatcatcatcaaaggg
gggnnccccagccacaatatcctgatgacccgtcacgtaccaggactccagattggtcaa
ctcactcgtcacgagattgacatgacagagcatgagtggaggtacgcagatggtcggtct
atgactcgagaggactttatggacattttgttctacgtggactatattctaattaaggcc
tcacatggaaacttgatgagacacagccgcatttcagaaatcagtctgacagtagctgag
gaaggcagaccgagcaaagatagcgagaaagcgcatcagatcgaaaagtgcgactgtccc
atcggatactcggggctctcctgcgaggaatgtgctgcaggattctaccgcctccgggcc
ggttggctggcgtctgctccagcatccaaggtacccacagctgctggcatgggcagctgt
gttcagtgccagtgcagtgggcattcttccacctgtgaccccgagacgtccatatgccag
agctgccgtgacaacacagaaggcgaccggtgcgagcgctgcgctccggggttttacggt
gtcgtccggggtttccgcgatgactgcaagccctgtgcctgtcccctcaccaacccagaa
aacaatttcagcccgacttgtgcagcggaaggatttgaggactacagatgcaccgcctgt
ccagagggacatgaggggaaatactgtgagaggtgtgccacaggttaccacggtgaccca
aagagcccaggcgggcgctgcgaggaatgtaagtgttccgcgtggggggcgttgcctgga
ccgtgtgaccccgtcacaggccaatgccgctgcagggtcggggcaacgggaccgtcgtgt
gaccagtgcatggaaaggcatgtgtgtggacccactgggatcatctcttgtgatgatgaa
tgctcaggcctgctgatcagtgacatggatcgtctgtatcgcatcatcgctgatgtcacg
ctgaccacccctctcccgccaccttacaagctcttgtaccgcttcgagaacatgacggag
gagctgaagcacatgctgtctcctcagagagctccagagagattactgcaactggctgac
tccaacctggaatctctggtcattgagatggaccaactgcacagccgagctacaaaggtg
tctgctgatggagagcaagttgaggatgacgctgccaggatccataaacgagccgaggag
ctggagcagtttgtcagggacacgctgctgagagccacagacctccagctaaaggcagca
gaggtgaacaagacgctctcgcggaacgatgggagtccagacaaaagcctgaaggtgatg
aaggaggacatccaggcgatgctagctgagatgaggaaacgacagctggcggggcagaaa
ngcatcgccgaggacgagctccagcttgcagcagagttgtatcaaaacgtgcagaggtta
tttggtgacccccatcagtccactgaagacttgaaagtagagataaaagagaaactagca
gatcatggcgggaagctccaagaggcccaggatcttctccactcggcccggggaaataca
aggcaggctggctcgctggctgaacaaaaccaagctaacctcgcaaccctggagagaaaa
cgctctgcggtcagtaaagtgaagcaggaagcccaggaggtcctggaacaaggggaacat
ctgctggctgaagcgaaccaactctctgacaacataaacaaggaagttgaggaggcggaa
gagatggaaaaagggctgagtccacttggagatcagctagaagagagagtcaggcacctg
gccgacggcctgggcaacggccgtctggctaatcgcgtgctggaggcggaggagcacgcg
cagcaactgaatgactctgctgccatcttggatagcattttgaccgacgccaaaagcgtg
tccctcaatgcaactgcagccttcaaggcctacagcaatattaaagcaaacattgatgca
gcagagaaggaagcaaaggcggcaaaacagagggcgagtgaggccctggatctggctttg
ggcccagaggttccagtcagtgaagaagctcaaagtgcccttcagaagagccacaagctg
ctaaatcaagcccagcagcttggaagtgacgtcaaaggtaccgatgagagtgtgatgagg
ctgaagggcagagttaaagcagcgcgagacagaaccaaagacctgctgagagctgtcaat
ggaaccatggaaacgctcatcaccatccccaacgacacggcggcgaggctggcggccacg
aaggctgtcgcggcagatgctaacagcaccgccatcgacgtcctggaacgcctcggggaa
ttgaacctacaccttcgcggactgcagagaaactacagcgagctggaggacaccgtcaag
gcggccaatcagatgatccaggatccagagaagaacacgatcattcacgctgcaggagct
aaagtgaaagatttggaggacgaggctgaccggttgttggagaagctgcagccaatcaga
aagctgcaggataatcttagacgcaacatctcgcaaatcaaggaactgatcaatcaagcc
aggaaacaagctaactctattaaagtgtcagtgtcatcgggtggtgactgcctccgcagc
acccgccccgatatacggaaagggaggtacaacaccatcacccttcacgttaagaccacc
acaaccgacaatctgctgctctacctgggatcagccaagttcattgatttcctggccttg
gaaatgcgtaaagggaaggtgaatttcctctgggatgtcggctcangcgttgggagggtt
gaatattcccatcacaccatccatgatgggaactggcacaggatcgaggcgtctcgaaat
gggctgaatggcaccatttcagtgtatcctctggaaggatctatggcaggtatgatgccg
accccggccagcgccaactcaccctccgcctacaccatcttggacgtggaccagaacgcc
tacctgttcngtgggggaatatttggcaaagtcaagaaagcagaggtggtgcgaacctcc
acgttcacgggctgtatgggggagaccttcttggatgggaaacctattggattgtggaac
tacagacagagacagggagactgtaaaggatgcgtggtcagcccccaacgctcagatggt
gaagggacagttcagctggacggcgaaggttatgcggccgtggggcgacccaccaggtgg
aaccccaacatttccacggtggccttcaagttccgcaccttctcgtccgactccctgctc
atgtatttagcgactgaggacatggtgggtatgcagagttaa
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integrated database retrieval system
