Takifugu rubripes (torafugu): 445951
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Entry
445951 CDS
T02386
Symbol
ybx1
Name
(RefSeq) nuclease-sensitive element-binding protein 1 isoform X2
KO
K09276
Y-box-binding protein 1
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
445951 (ybx1)
03019 Messenger RNA biogenesis [BR:
tru03019
]
445951 (ybx1)
03041 Spliceosome [BR:
tru03041
]
445951 (ybx1)
Transcription factors [BR:
tru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
445951 (ybx1)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
445951 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
445951 (ybx1)
Spliceosome [BR:
tru03041
]
Common components
Common spliceosomal components
General mRNP proteins
445951 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
445951
NCBI-ProteinID:
XP_003963190
Ensembl:
ENSTRUG00000024170
UniProt:
A0A3B5KFS8
LinkDB
All DBs
Position
3:7137079..7140933
Genome browser
AA seq
298 aa
AA seq
DB search
MSSEAETQQAPQPAADEEGPSSPAAAASAGDKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKYAA
DRNRYRRFPRRRGPPRGGDYPENYQSDGEGEPGSGGHDKSSGGENAPEGDSQQQRRPTYP
GRRRYPPYFGGEGDDNQGGPEQGNRPARQYYRGFRPRFRPRGPPRPRPVRDGEEDKENQG
GEGGQNQQPRQRRSRQNYRRRRPQTGGKPGPETKEAKTGGDPSAEKTSAPEAQQGGAE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaacaagcgccgcagcctgctgccgatgaggagggacca
tccagcccggcagccgcagcttctgcgggggataagaaggtcatcgcaacaaaagtcttg
ggtacagtcaaatggttcaacgtcaggaatggatatggttttatcaacaggaatgacaca
aaagaagatgtgtttgttcaccagacggcaatcaagaagaacaaccccaggaagtacctc
cgtagtgtaggagatggagagactgtagaatttgatgttgttgagggggagaagggagca
gaggcggcaaatgttaccgggccagggggggtcgcagtccagggtagcaaatacgccgca
gacaggaaccgctacagacgctttccacggcggaggggccctcctcgcggtggcgactac
ccagagaactaccagagtgacggggagggtgagccaggcagcggaggccacgacaaaagc
agtgggggagagaacgcccctgaaggagactcgcagcaacagcgcagacccacctacccc
ggcagacggcgttaccctccatattttggaggcgaaggtgacgacaaccagggaggtcca
gaacagggcaacagaccagcaaggcagtactacagaggcttccgaccaagattcagaccc
aggggcccacctcgtcccagaccggtgagggacggcgaggaggacaaggagaaccagggc
ggcgaaggtggtcagaaccaacagccacgccagcggcgttcccgtcagaactaccgccgc
agacgtccacagactggcggcaaacccggcccggagaccaaggaggccaagacaggaggt
gacccatccgcagagaaaacgtccgctcccgaggcccagcagggtggggctgagtag
DBGET
integrated database retrieval system
