Tropicibacter oceani: QF118_00390
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Entry
QF118_00390 CDS
T09169
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
try
Tropicibacter oceani
Brite
KEGG Orthology (KO) [BR:
try00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
try01011
]
QF118_00390
Enzymes [BR:
try01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
QF118_00390
Peptidoglycan biosynthesis and degradation proteins [BR:
try01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
QF118_00390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
WGW04031
LinkDB
All DBs
Position
complement(72981..74933)
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AA seq
650 aa
AA seq
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MSRLLACLLLLCTTFAAQAQNSGQALARAMDAMRDGNWAKARIEARVDGQAALDVILWHA
LRAGRGDPAEVQDFLARNPDWPGLAYLREKSEVVMSEASAAEVRAFFADDLPQTGAGALA
LARAQNEAGEAGAAEANVVLAWRTLSLGSDERRAFVEDWGSLLQDHHVARLDMALWKGWS
SNASAMIPLVDEDWQKLAEARLALRGNEAGVDGKIAAVPAKLADHPGLAFERFLWRVRKG
RDAEAIELLLAQSTSAASLGEPWAWANVRHDLARERMRDGAVLEAYKIASTHFLVDGSDF
AELEWLSGYLALRYLDRADLAEAHFKRFRAAVWTPISVGRAGYWLGRALEAQNKSAEAAA
AYAEGAKFQTSFYGLLAAERGGIAPDPTLAGTEEFPDWRTAAFTKTSVFQASVLLMAAGE
TALSERFLTHIAESLDRSGMGQMGQMLEEFKRPHMQVMLGKRAAQYGFELPGPYYALHPD
IVGREFPVPKELVLSIARRESEFDPVVISGAGARGFMQLMPGTARDVSGWLNLEYDADKL
LTDPSYNATLGAAYLANLAGRFDGNAVMMAAGYNAGPGRPNQWMERFGDPRKGEVDVIDW
IEFIPFDETRNYVMRVTESLPVYRARLGKDPHPVPFSQELIGTTLQAIVD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccttctggcctgtctccttttgttgtgtaccacctttgctgcgcaggcccag
aacagcgggcaggccttggcgcgcgcgatggacgccatgcgggacggcaactgggccaag
gcccgaatcgaggcgcgcgtcgacggccaggcggcgctggacgtgatcttgtggcacgcg
ctgcgcgccgggcgcggcgatcccgccgaggtgcaggatttccttgcccgcaaccccgac
tggcccggccttgcctacctgcgcgagaaaagcgaagtcgtcatgtccgaggcctctgcc
gccgaggtgcgcgcctttttcgccgatgacctgccgcagaccggtgcaggcgccctggcg
ctggcccgtgcgcaaaacgaggcaggcgaagccggcgccgccgaggcgaatgtcgtcctg
gcctggcgcacgctgtcactgggcagcgacgaacgccgcgcctttgtcgaagactggggc
agcctgcttcaggaccaccacgtcgcgcgcctggacatggcgctgtggaaaggctggagc
agcaacgccagcgcgatgattccgcttgtcgacgaagattggcaaaagctggccgaggcc
cgcctggccctgcgcggcaacgaagcgggagtggatggcaagatcgccgcggtgcccgcc
aaactggccgatcacccggggctggcctttgagcggttcctgtggcgcgtgcgcaagggg
cgcgacgccgaggccatcgaattgcttctggcccagtccaccagtgccgccagcctgggc
gaaccctgggcctgggccaatgtccgtcacgatctggcgcgcgaacgcatgcgcgacggc
gcggtactcgaagcctacaagatcgcttcgacccatttcctcgtggacgggtcggatttc
gccgaactggaatggctgtcgggctatcttgccctgcgctaccttgatcgcgccgatctg
gccgaagcccacttcaaacgctttcgcgcggcggtctggacgccgatctcggtcgggcgt
gcgggctattggctgggccgcgcgctggaagcgcagaacaaatccgccgaggccgccgcc
gcctatgccgagggcgcaaagttccagacctccttctatggcttgctggcggccgaacgc
ggcggcatcgccccggacccgacccttgccgggaccgaggaattccccgactggcgcacc
gccgcgttcaccaagacctcggtgttccaggcctctgttctgctcatggctgccggggaa
acggcgctgtccgaaaggttcctgacccatatcgccgaaagcctggaccgcagcggcatg
ggccagatgggccagatgctcgaggaattcaaacgcccgcacatgcaggtcatgctgggc
aaacgcgccgcccaatacggtttcgaactgcccggcccctattacgccctgcaccccgac
atcgtcggcagagagttcccggttccgaaagagctggtcttgtccatcgcccggcgcgaa
tccgaattcgatcccgtggtcatctcgggcgccggggcgcgcggtttcatgcagctgatg
cccggcacggcgcgcgatgtctcgggctggctgaacctcgagtatgatgccgacaaactg
ctgacagacccgtcctacaacgcgacgctcggggcggcctatcttgccaacctggcgggg
cgtttcgacggaaacgcggtgatgatggcggcaggctacaatgccgggccgggccgcccc
aaccaatggatggaacgctttggcgacccccgcaaaggcgaggtcgacgtgatcgactgg
atcgaattcatccccttcgacgaaacgcgcaactatgtcatgcgcgtcaccgaaagcctg
ccggtctatcgcgcccggctgggaaaggacccgcatccggtgcccttcagccaggaattg
atcgggacaaccttgcaggccatcgtcgactga
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