Tropicibacter oceani: QF118_01390
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Entry
QF118_01390 CDS
T09169
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
try
Tropicibacter oceani
Pathway
try00300
Lysine biosynthesis
try00470
D-Amino acid metabolism
try01100
Metabolic pathways
try01110
Biosynthesis of secondary metabolites
try01120
Microbial metabolism in diverse environments
try01230
Biosynthesis of amino acids
Module
try_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
try00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QF118_01390 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QF118_01390 (dapF)
Enzymes [BR:
try01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QF118_01390 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WGW04217
UniProt:
A0ABY8QJ87
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Position
280868..281701
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AA seq
277 aa
AA seq
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MEKTRETGLPFMKMHGLGNDFVVIDARVPGIQVTPALAIAVADRHMGVGFDQLAVIEQTD
KGDAHLVFYNADGSTAGACGNATRCIARFLMDETGQDSLTLTTQRGTLFARDASNGLTSV
NMGAPQLVWNEIPLAQAMDTLELPIEGRPTATGMGNPHCTFFVEDAEAVYLEDFGPRFEH
HPMFPQRTNVQVASLIAPDHLRMRVWERGVGITMASGSSSCATAVAAARRGLTGRKVQID
LDGGTLWIDWREDGVWMTGATAHVFDGVFTPAFMAAL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacgcgcgaaacgggcttgcccttcatgaagatgcacgggctggggaacgac
tttgtcgtgatcgacgcccgtgtgcccggtattcaggtgaccccggcattggccatcgcg
gtggctgaccggcacatgggcgtcggctttgaccagctggcggtgatcgaacagaccgac
aagggcgacgcgcatctggtgttttacaacgccgacgggtccactgcaggggcctgtggc
aacgccacccgctgcatcgcgcgtttcctgatggatgagaccgggcaggacagcctgacc
ctgaccacccagcgcggaaccttgtttgcgcgcgacgcgagcaacgggctgacctcggtc
aacatgggcgcgccgcaactggtctggaacgaaattccgctggcgcaggccatggataca
ctggaactgccgatcgagggacgccccaccgcaactggcatgggtaacccgcattgcacc
tttttcgtcgaggacgccgaagcggtttatctcgaggacttcggcccgcggttcgaacat
cacccgatgttcccgcagcgcaccaatgttcaggtcgccagcctgatcgcccccgaccac
ctgcgcatgcgggtctgggaacgcggcgtggggatcaccatggcctctggctcgtcctct
tgcgccacggccgtggcagcggcgcgccggggtctgacggggcgcaaggtgcagatcgat
ctggacggcggcacgctgtggatcgactggcgcgaggatggcgtctggatgaccggcgcc
accgcccacgtctttgacggcgtgttcacccctgcctttatggccgcgctatga
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