Tropicibacter oceani: QF118_03400
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Entry
QF118_03400 CDS
T09169
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
try
Tropicibacter oceani
Brite
KEGG Orthology (KO) [BR:
try00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
try03009
]
QF118_03400
Enzymes [BR:
try01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
QF118_03400
Ribosome biogenesis [BR:
try03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
QF118_03400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
TRAM
MTS
TRM5-TYW2_MTfase
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
WGW04611
LinkDB
All DBs
Position
720819..722045
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AA seq
408 aa
AA seq
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MTTIKIERLGHKGDGIAAGPIFVPGALPGEEVTGDVKGGVMAAPKIVTPVPDRVKPPCAH
AKGCGGCQLQHASDGFVADWKTQVVARALEAHDLSTEIRPCITSAAQSRRRASFSARRTK
KGALAGFHQKGSDVIVPVPNCRLVTPALAASLPMVEALAVLGASRKGEISVLVTQSRTGL
DVSVTGGKEMDADFRRDLADLARDHDLARIAWDDEVLTRRAPIQRFGKADVTPPPGAFMQ
ATEDGEAALLAGVREALGPLGKNAKIADLFAGCGTFSLPLAQDARVHAVEGDQAMMQALD
HGWRNAEGLKLVTHQVRDLFRNPLMLDELDRLDGVVIDPPRAGAEAQMVEIARARVPKVA
HVSCNPVTFARDCAVLTRAGYRLDFVQVVDQFRWSTHVEVVAGLTLIK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgatcaagattgaacgactgggccacaagggtgacgggatcgccgctgggccg
atctttgttcccggcgccttgccgggcgaagaagtgacgggtgacgtcaaaggtggcgtc
atggccgcgcccaagattgtcacgcctgtgccggatcgggtgaaaccgccctgcgcccat
gccaagggttgcggcggctgccaattgcagcacgccagcgacggttttgtcgcggattgg
aaaacgcaggtcgtggcccgggcgcttgaggcgcatgatctgagtacggaaatcagaccc
tgcatcacctcggccgcgcaatcgcggcggcgcgcgtccttttcggcgcggcgcacgaaa
aagggtgccttggctggttttcaccaaaagggatcggacgtgatcgtgccggtgccgaat
tgccggctggtgacgcccgcgctggcggcgtctttgcccatggtcgaggcgctggccgtt
ctgggggccagccgcaaaggcgagatttccgtgctggtgacgcaaagccggacggggctg
gatgtgtccgtgactggcggcaaggagatggacgcggatttccggcgcgacctggccgat
ctggcgcgggaccatgatctggcgcgcatcgcctgggacgacgaggtgctgacccgccgc
gcgccgatccagcgctttggcaaggccgatgtcacgccgccgcccggcgccttcatgcag
gcgaccgaggatggcgaggccgccctgctggccggtgtccgcgaggcgctgggccccttg
ggcaaaaacgccaagatcgccgatctgttcgccggatgcggcaccttttccctgcctttg
gcacaggatgcccgcgtgcatgccgtcgaaggcgatcaggccatgatgcaggcgctggac
cacggttggcgcaatgccgaagggctgaagctggtgacacatcaggtgcgcgacctgttc
cgcaatcctttgatgctggacgagttggaccgccttgacggcgttgtcatcgacccgccg
cgcgccggggccgaggcgcagatggtcgagattgcccgcgcccgcgtgccgaaggttgcg
catgtgtcctgcaacccggtgacctttgcgcgcgattgcgccgtgctgacccgcgcgggc
tatcgtctggatttcgtgcaggtcgtcgaccagttccgctggtccacccatgtcgaggtg
gtggccgggctgacgctgatcaaatga
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