Tropicibacter oceani: QF118_04835
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Entry
QF118_04835 CDS
T09169
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
try
Tropicibacter oceani
Brite
KEGG Orthology (KO) [BR:
try00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
try03016
]
QF118_04835 (truB)
Enzymes [BR:
try01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QF118_04835 (truB)
Transfer RNA biogenesis [BR:
try03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QF118_04835 (truB)
Prokaryotic type
QF118_04835 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF4945
Motif
Other DBs
NCBI-ProteinID:
WGW04876
LinkDB
All DBs
Position
complement(1016910..1017824)
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AA seq
304 aa
AA seq
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MARKRKGRDISGWLVVDKPAGITSTAVVNKVRWALDARKAGHAGTLDPEATGVLAIALGE
ATKTVPYITDALKAYRFTVRLGQATNTDDTEGEVIATSDLRPTDDQIKEALHQFVGDIMQ
VPPQFSAVKIDGERAYKRARDGEEMEIAARPLWVEELVMTDRPDADHVELEMTCGKGGYV
RSIARDLGKVLGCHGHVLTLRRIWSGPFDVEDGISIQQIDELAKTPALNAYIRPLEQGLA
DLPELKATPEGATRLRNGNPGMVIASDVEYGDEAWASLDGQPIAVGVYKAGELHPTRVFV
QAQD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaagcgcaagggtcgcgacatttccggttggcttgtggtcgacaaacccgct
ggcatcacttcgaccgccgtggtcaacaaggtgcgttgggcgctggatgccaggaaggcc
ggccatgccggcacgctggaccccgaggcgacgggcgttctggccatcgccctgggcgag
gctaccaaaactgtcccctacatcaccgacgcgctcaaggcctaccgctttaccgtgcgc
cttggacaggcgaccaataccgacgacaccgaaggcgaggtgatcgcaaccagcgatctg
cgccccacggatgatcagatcaaggaagccctgcaccagtttgtcggcgacatcatgcag
gtgccgccgcaattctcggcggtgaaaatcgacggcgaacgcgcctacaaacgcgcccgc
gacggcgaggaaatggaaatcgccgcccgccccctctgggtcgaggaactggtgatgacc
gaccgccccgacgccgaccacgtcgagctggaaatgacctgtggtaaaggcggttatgtc
cggtccatcgcgcgcgatctgggcaaggttctgggctgtcacggccacgtgctgaccctg
cgccgcatctggtccgggccatttgatgtcgaggacgggatcagcattcagcagatcgac
gaactggccaagaccccggcgctgaacgcctatattcgcccgctcgaacaaggtcttgcc
gacctgcccgagctcaaggccacccccgaaggcgcaacccgcctgcgcaacggcaacccc
ggcatggtcatcgcctcggacgtggaatacggcgacgaggcatgggcctcgctcgacggt
cagcccatcgcggtcggcgtctacaaggcaggcgaattgcatcccacccgggttttcgtg
caggcgcaggactag
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