Tropicibacter oceani: QF118_05160
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Entry
QF118_05160 CDS
T09169
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
try
Tropicibacter oceani
Brite
KEGG Orthology (KO) [BR:
try00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
QF118_05160 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
try03019
]
QF118_05160 (rnc)
03009 Ribosome biogenesis [BR:
try03009
]
QF118_05160 (rnc)
03036 Chromosome and associated proteins [BR:
try03036
]
QF118_05160 (rnc)
Enzymes [BR:
try01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
QF118_05160 (rnc)
Messenger RNA biogenesis [BR:
try03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QF118_05160 (rnc)
Ribosome biogenesis [BR:
try03009
]
Eukaryotic type
90S particles
RNase
QF118_05160 (rnc)
Prokaryotic type
rRNA processing factors
QF118_05160 (rnc)
Chromosome and associated proteins [BR:
try03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
QF118_05160 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WGW04939
UniProt:
A0ABY8QK04
LinkDB
All DBs
Position
complement(1080120..1080809)
Genome browser
AA seq
229 aa
AA seq
DB search
MKLSADLKELEQRLGYRFARPDLLRQAVTHGSMSGPGREDNQRLEFLGDRVLGLVMAQAL
LEHDKTATEGQLAPRFNALVRKETCADVAREVDIGAALKLGRSEQKTGGRRKMALLGDAM
EAVIAAVYLDGGFDAAQALTLRLWGKRIANVEDDAKDAKTALQEWAQARGLEPPLYLETA
RSGPDHAPVFTIEARLSTGDQAEATASNKRQAEQAAAKALLARVRQAKA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttcggcggacctgaaagagctggagcagcggctgggctatcgctttgcccgg
cccgacctgttgcggcaggcggtcacgcatgggtcgatgtccggccccgggcgcgaggac
aaccagcggctggaattcctgggcgaccgggtgctgggcctggtcatggcgcaggcgctt
ttggagcatgacaagaccgcgaccgagggccagctggccccgcggttcaacgccctggtg
cgcaaggaaacctgcgccgatgtcgcgcgcgaggtggatatcggcgcggcgctcaagctg
ggccgctcggagcaaaagaccggcgggcggcgcaagatggcgctgctgggcgacgcgatg
gaggcggtgattgccgccgtctacctggatggcggctttgatgcggcgcaggcgctgacc
cttcggctttggggcaagcgcatcgccaatgtcgaggacgacgccaaggacgccaagacc
gcgcttcaggaatgggcgcaggcccgcggcctggaaccgcccctgtacctggaaaccgcc
cgttccggccccgaccacgcgcccgttttcaccatcgaggcccgcctgagcacaggcgac
caagccgaggccacggccagcaacaagcgccaggccgaacaggccgccgccaaggcactg
ctggcgcgggtccgtcaggcaaaggcctga
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