Tropicibacter oceani: QF118_08000
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Entry
QF118_08000 CDS
T09169
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
try
Tropicibacter oceani
Pathway
try03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
try00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
QF118_08000 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
try03011
]
QF118_08000 (rpsA)
Ribosome [BR:
try03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
QF118_08000 (rpsA)
Bacteria
QF118_08000 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
DUF3592
NHase_beta_C
Motif
Other DBs
NCBI-ProteinID:
WGW05478
UniProt:
A0ABY8QNE9
LinkDB
All DBs
Position
1654553..1656232
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AA seq
559 aa
AA seq
DB search
MANATMEEFEALLNESLEMDTPDEGTVVKGKVIAIEAGQAIIDVGYKMEGRVDLKEFAEP
GEAPKVAVGDEVEVYLRAAENARGEAVISREMARREEAWDRLEKAYADDARVEGAIFGRV
KGGFTVDLGGAVAFLPGSQVDVRPVRDAGPLMGLKQPFQILKMDRRRGNIVVSRRAILEE
SRAEQRAEVIANLTEGQAVDGVVKNITEYGAFVDLGGVDGLLHVTDMAWRRVNHPSEILT
IGETVKVQVIKINKDTHRISLGMKQLQEDPWDLVGAKYPLASVHKGRVTNITDYGAFVEL
EPGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVMVLEIDGAKRRVSLGLKQTQRNPWEV
FAETHPEGTQVEGEVKNITEFGLFIGLEGEIDGMVHLSDLSWDQRGEEAIQEYRKGDIVQ
AVVSEVDVEKERISLSIKALGGDKFADAVGGTKRGSIVTVEVTAIEDGGIEVEYEGMKSF
IRRSDLSRDRAEQRPERFSVGDKVDVRVTNIDSKTRRLGLSIKAREIAEEKEAVEQYGSS
ASGASLGDILGAALKSGDE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgcaacaatggaagaattcgaagcactcctgaacgagagcctcgaaatggac
acccccgatgaggggactgtcgtcaaaggcaaggtcatcgcgatcgaagcgggccaggcc
atcatcgacgtcggctacaagatggaaggccgcgttgatctgaaagaattcgcagaaccc
ggtgaagctcccaaggtcgcagtcggcgacgaagtggaagtgtacctgcgcgcggctgaa
aacgcccgcggcgaagctgtcatctcgcgcgagatggcccgccgtgaagaagcctgggac
cgcctggaaaaagcatacgcagacgacgcccgcgtcgaaggcgcgatctttggccgtgtc
aaaggcggctttaccgtcgacctcggcggtgccgttgccttcctgcccggatcgcaagtt
gacgtgcgccccgtgcgcgacgccggcccgctcatgggtctcaagcagccgttccagatc
ctcaagatggaccgtcgccgtggcaacatcgttgtttcgcgccgtgcaatccttgaagaa
tcgcgtgccgaacagcgtgccgaagtcatcgccaacctgaccgaaggtcaggccgttgac
ggtgtggtcaagaacatcaccgagtacggcgcattcgtcgaccttggcggcgtcgatggc
ctgctgcacgtgaccgacatggcatggcgccgtgtgaaccacccctccgagatcctcacg
atcggcgagacggtcaaggttcaggtcatcaagatcaacaaggacacccaccgtatcagc
ctgggcatgaagcagctgcaggaagatccgtgggatctggttggcgccaagtacccgctg
gcttcggtccacaagggtcgcgtcaccaacatcaccgattacggtgcctttgttgagctc
gagcccggtgtcgaaggtctggtccacgtgtccgaaatgtcctggaccaagaagaacgtg
caccccggcaagatcgtttcgaccagccaggaagtcgacgtcatggttctggaaatcgac
ggcgccaagcgtcgcgtttccctgggcctcaagcagacccagcgcaacccgtgggaagtg
tttgcagaaacccaccccgagggcacgcaggtcgaaggcgaagtcaagaacatcaccgaa
ttcggtctgttcatcggcctcgaaggcgagatcgacggcatggttcacctttcggacctg
tcctgggatcagcgcggcgaagaagccatccaggaataccgcaagggcgacatcgtccag
gccgtggtttccgaagtcgacgtcgagaaagagcgtatctcgctctcgatcaaggctctg
ggtggcgacaagttcgctgacgccgttggcggcaccaagcgcggctcgatcgtgactgtc
gaagtcaccgcgatcgaagacggcggcatcgaagtggaatacgaaggcatgaagtccttc
atccgccgctccgatctgtcgcgtgaccgcgccgagcagcgccccgagcgtttctcggtc
ggtgacaaggtcgacgtgcgcgtcaccaacatcgacagcaagacccgtcgtctgggcctg
tcgatcaaggcacgcgaaatcgcagaagagaaagaggccgtcgaacagtatggctcttcc
gcttcgggcgcatcgctgggcgacatccttggcgcagccctcaagagcggcgacgagtaa
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