Tropicibacter oceani: QF118_08130
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Entry
QF118_08130 CDS
T09169
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
try
Tropicibacter oceani
Pathway
try00260
Glycine, serine and threonine metabolism
try00460
Cyanoamino acid metabolism
try00630
Glyoxylate and dicarboxylate metabolism
try00670
One carbon pool by folate
try00680
Methane metabolism
try01100
Metabolic pathways
try01110
Biosynthesis of secondary metabolites
try01120
Microbial metabolism in diverse environments
try01200
Carbon metabolism
try01230
Biosynthesis of amino acids
try01240
Biosynthesis of cofactors
try04981
Folate transport and metabolism
Module
try_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
try00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QF118_08130 (glyA)
09102 Energy metabolism
00680 Methane metabolism
QF118_08130 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QF118_08130 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
QF118_08130 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QF118_08130 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
QF118_08130 (glyA)
Enzymes [BR:
try01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
QF118_08130 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WGW05502
LinkDB
All DBs
Position
complement(1681977..1683272)
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AA seq
431 aa
AA seq
DB search
MTASHRDTGFFTETLETRDPQLFGAIKGELGRQRDEIELIASENIVSRAVMEAQGSVMTN
KYAEGYPGRRYYGGCDWVDVAENLAIERACQLFGCEFANVQPNSGSQANQGVYQALIQPG
DTILGMSLDAGGHLTHGAKPNQSGKWFNAIQYGVRQQDNTLDYDQVQELALAHKPKLIIA
GGSAIPRQIDFARMREIADMVGAYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTLR
GPRGGMILTNDETIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKAYAKQVILN
AQALSDQLIKGGLDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKNGVPFDPE
KPTITSGIRLGSPAGTTRGFGEAEFRQIADWIIEVVDGLAANGEDGNAEVEAKVKAEVEA
LCARFPIYADL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatcccaccgtgacaccggtttcttcaccgaaacgcttgaaacccgcgaccct
cagcttttcggcgccatcaagggcgaacttggtcgccagcgggacgagatcgagctgatc
gcctcggaaaacatcgtgtcccgcgccgtgatggaagcgcagggcagcgtgatgaccaac
aaatacgccgaaggctatccgggccgccgctattatggcggctgcgactgggtcgacgtg
gcggaaaacctggccatcgaacgcgcctgccagctgttcggctgtgaattcgccaacgtg
cagccgaactcgggctcgcaggccaaccagggggtgtatcaggcgctgatccagcccggc
gataccattctggggatgagcctggatgcgggcggccacctgacccacggcgccaaaccg
aaccagtcgggcaagtggttcaacgccatccagtacggcgtgcgccagcaggacaacacg
ctggactacgatcaggttcaggaactggcacttgcccacaaacccaagctgatcatcgcc
ggcggcagcgccatcccgcgccagatcgactttgcccgcatgcgcgaaatcgccgatatg
gtcggcgcctacctgcatgtggacatggcgcattttgccggtctggtggcagcgggcgaa
cacccctcgcctttcccgcatgcgcatgtggccaccaccaccacgcataaaaccctgcgc
ggcccgcgcggcggcatgatcctgaccaacgacgaaaccatcgccaagaaagtgaactcg
gcgatcttcccgggcattcagggcggcccgctgatgcacgtcatcgccgccaaggccgtc
gcctttggcgaagcgctgcgccccgaattcaaggcctacgccaagcaggtgatcctcaac
gcgcaggcgctgtcggaccagctgatcaagggcggtctcgacaccgtgacccacggcacc
gacacccacgtcgtgctcgtcgacctgcgccccaaaggggtcaagggcaacgccaccgaa
aaggcattgggccgcgcgcacatcacctgcaacaagaacggcgtgccgtttgatcccgaa
aagccgacgatcacatccggcatccggctgggcagccccgccggaaccacccgcggtttc
ggtgaggccgagttccgccagatcgccgactggatcatcgaagtcgtcgatgggctggcg
gcgaacggcgaagacggcaacgccgaagtcgaagccaaggtcaaggccgaggtcgaggcg
ctgtgcgcgcgcttcccgatctacgcagacctttga
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