Tropicibacter oceani: QF118_12290
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Entry
QF118_12290 CDS
T09169
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
try
Tropicibacter oceani
Brite
KEGG Orthology (KO) [BR:
try00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
try03000
]
QF118_12290
Transcription factors [BR:
try03000
]
Prokaryotic type
Helix-turn-helix
LysR family
QF118_12290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Sigma70_r4
HTH_IclR
HTH_24
HTH_28
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WGW02716
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All DBs
Position
2536886..2537779
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AA seq
297 aa
AA seq
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MSKTDDLPPLNALRAFAAAGRHLTFRAAAGELGVTQGAVAQHVRALEARLELPLFERHPR
GLTLTEAGRRYHAQLERAFRILTEATHDLRPGPQRVTISVTPSFAAKWLIPNMADFAAAH
PTVDLRVMATETLSRFQADGVDIVVRYGVPPFGAALEDRQLFREGVIPVCSPRLLEQAVD
LTGLSLLHDSTDLWPDYIEQVLGMARPKRLSGPRFSTISLALDAAMAGQGVALANRFMVA
RELASGRLVQAHDGALRTPQGYHALTPRENLKNPAVRAVFEWLSTCASGETQPATHA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagacggacgacctgccgccgctgaacgccctgcgcgcctttgcggccgccggg
cgccacctgacctttcgcgccgccgccggggaactgggcgtgacccagggcgcggtggcc
cagcatgtgcgcgcgcttgaggcgcggctggagctgccgctgttcgaacgtcatccgcgc
gggctgaccctgaccgaggccgggcggcgctatcacgcgcaactggaacgcgcctttcgc
atcctgaccgaggcgacgcatgatttgcgccccggcccgcagcgggtgacgatttcggtc
acgcccagtttcgcggccaagtggctgatccccaacatggccgatttcgccgccgcccat
cccacggttgacctgcgcgtcatggcgaccgaaacgttgtcgcgctttcaggcggacggg
gtcgatatcgtggtgcggtatggtgtgccgccctttggtgcggcgctggaggaccggcaa
ttgttccgcgaaggggtgattcccgtctgctcgccccggctgttggaacaggcggtggac
ctgaccgggctaagccttttgcatgattccaccgacctgtggcccgattatatcgaacag
gtgctgggcatggcgcggcccaaacgcctgtcgggcccgcgcttcagcaccatttcactg
gcgctggacgcggcgatggccgggcagggggtggcgctggccaaccgcttcatggtggcg
cgcgaattggccagcggccggttggtccaggcgcatgacggggcgctgcgcacgccgcag
ggctatcacgcgctgaccccgcgcgagaacctcaagaatccggcggtccgggcggtcttt
gaatggctgtccacatgcgcatccggcgaaacgcagccagcaacgcacgcatga
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