Tropicibacter oceani: QF118_12495
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Entry
QF118_12495 CDS
T09169
Symbol
ihfA
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
try
Tropicibacter oceani
Brite
KEGG Orthology (KO) [BR:
try00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
try03032
]
QF118_12495 (ihfA)
03036 Chromosome and associated proteins [BR:
try03036
]
QF118_12495 (ihfA)
03400 DNA repair and recombination proteins [BR:
try03400
]
QF118_12495 (ihfA)
DNA replication proteins [BR:
try03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QF118_12495 (ihfA)
Chromosome and associated proteins [BR:
try03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
QF118_12495 (ihfA)
DNA repair and recombination proteins [BR:
try03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
QF118_12495 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Phage_tail_terminator_2
Motif
Other DBs
NCBI-ProteinID:
WGW02754
LinkDB
All DBs
Position
complement(2580549..2580851)
Genome browser
AA seq
100 aa
AA seq
DB search
MSDKTLTRMDLSEAVFQEVGLSRNESAELVESVLQMMSDALVEGEQVKISSFGTFSVREK
AARVGRNPKTGEEVPIQPRRVLTFRPSHLMKERVAAGNKR
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaagacgctaacccgcatggatctgagcgaagcggtcttccaggaagtggga
ctgtcgcgcaacgaaagcgcggaacttgtcgaatccgttctgcaaatgatgtccgacgcc
ctggtcgagggtgagcaggtcaagatttcgtcctttggcaccttttcggtgcgcgaaaag
gcggcccgcgtcgggcgcaatcccaagaccggcgaagaggtgccgatccagcctcgccgc
gtgctgaccttccggccgtcgcacctgatgaaagaacgggttgccgccggcaacaaacgc
tga
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