Tropicibacter oceani: QF118_12655
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Entry
QF118_12655 CDS
T09169
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
try
Tropicibacter oceani
Brite
KEGG Orthology (KO) [BR:
try00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
try03036
]
QF118_12655
Chromosome and associated proteins [BR:
try03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
QF118_12655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
WGW02785
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All DBs
Position
complement(2620778..2621704)
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AA seq
308 aa
AA seq
DB search
MSARFWIANFLEAMAAERGAAANTLAAYERDLVHVQDWLGDQGLDFTDAQKADVESYLVH
CDTQGLSRATRARRLSAIKQLYRFAFEEGMRADNPAVQIAGPGRDKRLPKTLSIEEVDRL
LQAATRHGRTPADQQRNACLMQLLYATGMRVTELVSLPLVAARGDPRMLLIRGKGGKERM
VPLSPPAREALALWLATRDDQDAAARAQGKPVSAFLFPSRGKAGHLTRHAFYMLIKDFAV
EGGVSPDKVTPHTLRHAFATHLLANGADLRAIQTLLGHADVATTEIYTHVLEERLKELVL
DHHPLAKD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcgcttctggattgccaatttcctcgaggcgatggccgccgaacgcggcgcc
gccgccaacaccctggcggcctatgaacgcgatcttgtgcatgtccaggattggctgggc
gaccaggggctggatttcaccgatgcgcaaaaggccgacgtggaatcctacctggtgcat
tgcgatactcagggcctgtcccgtgccacccgcgcgcggcgtctgtcggcgatcaagcag
ctgtaccgctttgccttcgaggaaggcatgcgcgcggacaatccggcggttcagatcgcc
ggccccggccgcgacaagcgcctgcccaagaccctgagcatcgaagaggtggaccgcctg
ttgcaggccgccacacggcatggccgcacgcccgccgaccagcagcgcaacgcctgcctg
atgcagctgctttatgccaccgggatgcgcgtgaccgaactggtgtcgctgccgctggtg
gcggcgcggggcgatccgcgcatgttgttgatccgcggcaagggcggcaaggaacgcatg
gtgccgctgtcgccccccgcccgcgaggcgctggccctatggctggccacgcgcgacgat
caggacgcggcggcgcgcgcgcagggcaaacccgtctcggcctttctgttcccgtcgcgc
ggcaaggccgggcacctgacgcgccacgccttttacatgctgatcaaggattttgccgtc
gaaggcggcgtatcaccggacaaggtgacgccgcacaccctgcgccatgcctttgccacg
catcttttggccaatggcgccgacctgcgggcgatccagaccttgctgggccatgccgat
gtggccacgaccgagatttacacccacgtccttgaagaacggctcaaggaattggttctg
gaccatcacccgctggccaaggactga
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