Tropicibacter oceani: QF118_14590
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Entry
QF118_14590 CDS
T09169
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
try
Tropicibacter oceani
Pathway
try03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
try00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QF118_14590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
try03400
]
QF118_14590
Enzymes [BR:
try01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
QF118_14590
DNA repair and recombination proteins [BR:
try03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QF118_14590
Prokaryotic type
QF118_14590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WGW03142
LinkDB
All DBs
Position
3041620..3042267
Genome browser
AA seq
215 aa
AA seq
DB search
MTQPPGAWGHLAFFNRDWPAIRAAIAADSRQILPPDAQRFAALDACSPAQTRVVILGQDP
YPTPGHAHGLAFSVDPDVRPLPRSLTNIFKEMQDDLGAAPANGDLRFWAQQGVLLLNTAL
TVPAGAAGGHAKLGWSRLTQEVLEQLSDRPRAFVLWGNHAQGYASHITGPGHLILRSAHP
SPLSARRGFFGSRPFSQVNEWLKAGGDSPINWTTP
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcagccgcccggcgcctggggccatctggcctttttcaaccgcgactggcccgcg
atccgcgcggccatcgcggccgacagtcgccagatcctgccgcccgacgcgcagcgcttt
gccgcgctggacgcctgttcgcccgcgcaaacccgcgtcgtgatcctgggtcaggatccc
tatccgacccccggccatgcccatgggctggccttttcggtcgacccggatgtgcgcccc
ctgccccgatcattgaccaatattttcaaagagatgcaggacgatcttggcgcggcccca
gcaaacggcgatctgcggttctgggcgcaacagggcgttcttttgctgaacaccgcgctg
accgtgccggcgggcgcggcgggtggtcatgccaaactgggctggtcccgcctgacgcaa
gaggtgctggaacaactgtccgaccgtccgcgcgcctttgtcctgtggggcaaccacgcg
cagggctatgccagccacatcaccggccccggccacctgatcctgcgcagcgcgcaccct
tcaccgctgtcggcccggcgcggctttttcggctcgcgccccttttcccaagtcaacgag
tggcttaaagcgggtggggacagcccgatcaactggacaacaccatga
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