Tropicibacter oceani: QF118_15930
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Entry
QF118_15930 CDS
T09169
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
try
Tropicibacter oceani
Pathway
try03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
try00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QF118_15930 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
try03400
]
QF118_15930 (xseA)
Enzymes [BR:
try01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
QF118_15930 (xseA)
DNA repair and recombination proteins [BR:
try03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
QF118_15930 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
DHQ_synthase
CENP-O
Motif
Other DBs
NCBI-ProteinID:
WGW03401
UniProt:
A0ABY8QFL3
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All DBs
Position
complement(3323848..3325398)
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AA seq
516 aa
AA seq
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MSDLIDDGEAGNTPEFSVSELSGAVKRMIEGEFGFVRVRGEVGRVSRPRSGHIYLDLKDD
RSVISGIVWKGVAARLDTQPEEGMEVVATGRMTTFPGQSKYQIVIEDMRPAGMGALMAML
EKRKAQMQAEGLFDPARKRALPYLPDVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPVA
VQGKACAPEVARAIEGFNRLSPGGALPRPDLLIVARGGGSVEDLWGFNEDIVVRAAAASQ
IPLISAVGHETDTTLIDYASDRRAPTPTAAAEMAVPVRLELLSWVGEAGARMTRAMGQRI
DMRGQRLRDLSRALPRPEDLLEGPRQRLDVMGDRLPAALTRLVDRRRLQLSEQAGSLRPV
VLLRAIAAERARSADRGARLAPGLQRLVQVRREALARRMDRLSLRPIQREIAAQGDRLAA
LSRRMEQAHNGRLAEARRRLEAVDRLRETLGYRETLRRGYAVVHGDGHVLTTKAAAAAAS
GLEIEFADGRLKIGGGAAPKPAAKAKPKPPEQGSLF
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatctgatcgacgacggcgaggcgggcaatacgccggaattttcggtgtccgag
ctttcgggcgcggtcaagcgcatgatcgagggcgaattcgggtttgtccgggtgcgcggc
gaggtcgggcgcgtgtcgaggccgcggtcggggcatatctacctggatctcaaggatgat
cggtcggtgatttccgggatcgtctggaaaggcgtggcggcgcgtctggacacccagcca
gaagaaggcatggaggtggtggccaccggccgcatgacgaccttccccggccagtccaag
taccagatcgtcatcgaggacatgcgcccggcgggcatgggcgcgctgatggcgatgctg
gaaaagcgcaaggcgcagatgcaggccgaagggctgttcgatccggcgcgcaagcgggcc
ttgccctatctgcccgatgtgatcggggtggtcacgtcgcccagtggggcggtgatccgt
gatattctgcaccgcttgcgcgaccggtttccgcgtaaggtgctgatctggccggtggcg
gttcagggcaaggcctgcgcccccgaggtggcgcgggcgatcgaagggttcaaccgtttg
tcgccgggcggcgccttgccccggcccgatctgctgatcgtggcgcgcgggggcggatcg
gtcgaggatctgtggggattcaatgaggatatcgtcgttcgggcggccgctgccagccag
atcccgctgatttccgccgtgggccacgagaccgataccactctgatcgactacgcgtcg
gaccggcgggcgccgaccccgacggcggcggccgagatggcggtgccggtgcggcttgaa
ctgttgtcctgggtcggggaggccggtgcgcggatgacccgcgccatgggccagcgcatc
gacatgcgcggccagcggctgcgcgatctgtcgcgcgccttgccccgccccgaggacctt
ctggaagggccgcgccagcggctggacgtgatgggtgaccggctgccggccgccctgacg
cggctggtggaccggcggcgcctgcagctgtccgaacaggcgggcagtctgcggcctgtg
gtgttgctgcgtgcgattgccgccgagcgcgcccgcagcgccgatcgcggcgcgcggctg
gccccgggattgcagcgcctggtgcaggtgcggcgcgaggcgctggcgcggcgcatggac
cggctgagcctgcgtccgatccagcgcgagatcgcggcgcagggtgaccgcctggcggcc
ttgtcgcggcgcatggagcaggcccacaacggccgattggccgaggcccgccgcaggctg
gaagccgtggaccggctgcgcgagaccctgggctaccgcgaaaccctgcgccgtggctat
gcggtggtgcatggcgacgggcatgttctgaccacgaaagccgcggcggcggcggcctcg
gggctggaaatcgaattcgccgatggcaggctgaagatcggcggcggcgccgcgcccaag
ccggcggccaaggcaaaacccaagccacctgagcagggcagcctgttctag
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