Tropicibacter oceani: QF118_17535
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Entry
QF118_17535 CDS
T09169
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
try
Tropicibacter oceani
Pathway
try03410
Base excision repair
try03430
Mismatch repair
try03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
try00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QF118_17535 (recJ)
03430 Mismatch repair
QF118_17535 (recJ)
03440 Homologous recombination
QF118_17535 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
try03400
]
QF118_17535 (recJ)
DNA repair and recombination proteins [BR:
try03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QF118_17535 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QF118_17535 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QF118_17535 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Prok-RING_1
Flg_hook
Motif
Other DBs
NCBI-ProteinID:
WGW03697
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All DBs
Position
complement(3668508..3670253)
Genome browser
AA seq
581 aa
AA seq
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MAYLGVESSLTGRRWVGPTSEVERQSEALVQAHGYPRGLALVLARLGVTPAEAPGYLEPK
LRDLLPDPRSLRDMEKAAARFLEALRHRQKIAVFADYDVDGGSSAALLIHWLRQMGLGAT
LYVPDRIDEGYGPNAPAMRDLAAAHDLIVCVDCGTLSHEAIAAAKGADVVILDHHLGGET
LPECHAVVNPNRQDETGDLAHLCAAAVVFLMLVEAGRQLREAGAKGPDLMALLDLVALAT
VADVAPLKGVNRALVQQGLKVMGARARPGLVALADVAKLDTAPSSYHLGYVLGPRVNAGG
RIGQADLGARLLATDNPHEAQAMAERLDQLNTERRDIEAAVRAAALAQAEDRGLDAPLVW
AAGEGWHPGVVGIVASRLKELTNRPAVVIGLDGDEGKGSGRSVSGVDLGVSVQRLAAEGL
LIKGGGHRMAAGLTVARDKLEAAMERLSEMLAKQGAGQGGPSDLRLDGMLMPGAANLDLV
ENLERAGPFGQGAPGPRFAIADARISYARQVGTGHLKIACDDGLGGRLEGIAFGAFDGPM
GAALMNHGGARFHLAGRLEVNEWGGRRSVQLRLEDAAPAAG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
ttggcctatctgggcgttgagagcagtctgaccgggcgacgctgggtcggtccgacgtcc
gaggtggagcgccagtccgaggctctggtgcaggcgcacggctatccgcgcggactggcg
ttggttctggcgcggcttggggtcacgccggcggaagcgccgggctacctggagccgaag
ttgcgcgatctgctgcccgatccgcgatctctgcgcgacatggaaaaggctgcggcgcgg
tttctggaggcgctgcgccaccggcagaagatcgcggtttttgctgactatgacgtggat
ggcggcagttctgcggcgcttttgatccattggcttcggcagatgggtctgggggccacg
ctgtatgttccggaccggatcgacgagggctatggccccaatgcaccggcaatgcgcgat
ctggcggcggcgcatgatctgatcgtctgtgtcgattgcggaaccctgtcgcacgaggcg
attgctgcggccaagggggccgacgtggtgatcctggaccaccatctgggcggggaaacc
ctgcccgagtgtcatgcggtggtgaaccccaaccggcaggatgaaaccggtgatcttgcg
catctttgcgcggcggccgtggtgttcctgatgctggtcgaggcggggcgtcagctgcgc
gaggcgggggccaaggggccggacctgatggcgctgctggacctggtggcgctggccacg
gttgcggatgtcgcgcccttgaagggggtcaaccgggcccttgtgcagcaggggttgaag
gtgatgggcgcgcgggcgcggcccgggctggtggcgctggcggatgtggccaagctggat
accgcgccgtcgtcctatcacctgggctatgtgctggggccgcgggtcaatgcgggcggg
cgcatcgggcaggccgatctgggcgcgcggctgttggccactgacaacccgcacgaagcg
caggccatggccgaacggctggaccagttgaacactgaacggcgggatatcgaggcggcg
gtacgtgccgctgcccttgcgcaggccgaggaccgggggctggatgcgccgctggtctgg
gcggcgggcgagggttggcaccccggtgttgtcgggatcgtcgcatcgcggctgaaagag
ctgacaaaccgcccggcggtggtgatcggcctggacggcgacgagggcaagggatcgggc
cggtcggtttcaggcgtggacctcggggtatcggtacaaaggctggcggccgaggggctg
ttgatcaagggcgggggccaccggatggccgccggtctgacggtcgcgcgtgacaagctg
gaggccgcgatggagcgcctgtccgagatgctggccaagcagggcgcggggcagggcggg
ccctcggacctgcggctggacgggatgttgatgcccggcgcggccaacctggatttggtc
gaaaacctggagcgcgcggggccgtttggccagggcgcgccggggccgcgctttgccatt
gctgacgcgcggatttcctatgcgcggcaggtcggtaccgggcatctcaaaatcgcctgt
gacgacggtctgggcgggcggctggaaggcattgcctttggcgcctttgacgggccgatg
ggggcggcgttgatgaatcacggcggcgcgcgattccatttggcgggccgactcgaggta
aacgaatggggcgggcgccgttcggttcagcttcggctggaggatgcggcgcctgctgcc
gggtag
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