Tropicibacter oceani: QF118_17930
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Entry
QF118_17930 CDS
T09169
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
try
Tropicibacter oceani
Pathway
try02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
try00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
QF118_17930 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
try02000
]
QF118_17930 (rhaS)
Transporters [BR:
try02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
QF118_17930 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
WGW03772
LinkDB
All DBs
Position
3745476..3746477
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AA seq
333 aa
AA seq
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MKRRNFTKLALGLGLGASLMGTSAMAQDNMRIALVVKALGIGFFEAANKGAQEAAAELGN
VEIIYTGPTDTTAEGQIEVINSLIAQGVDAIAVSSNDTDALVPTLKKAMQRGITVISWDS
GVAEEGRQVHLNPSSNALIGNMIIKLAADHLPDGGQVALLSATTTSTNQNIWMEEMNKVM
GNYPGIEVVSTVYGDDLADKSYREAQGLMQSYPDLDAIIAPTSVGIVAAAQAVEDAGKIG
QVNVTGLGLPSEMAGAIESGASKSFAIWNPIDLGYSAAMIAHALASETATAEPGAEISIG
RMGTITLDETNSAAMADPFVYDSSNIDEFKSIF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcgtaatttcaccaaactcgcactgggccttggccttggcgcatcgctcatg
ggcacatcggccatggcgcaggacaacatgcgcatcgcgctggtggtcaaggcgcttggc
atcggcttcttcgaagccgcaaacaagggcgcacaagaggccgctgccgagcttgggaac
gtagagatcatctacaccggcccgaccgacaccaccgccgaaggccagatcgaggtgatc
aactcgctgatcgcccaaggcgtcgatgcgattgcggtgtcgtccaatgacaccgacgcg
ctggtgccgacgctgaaaaaggcgatgcagcgcggcatcaccgtgatctcgtgggacagc
ggcgttgccgaagaaggccgtcaggttcatttgaacccctcgtccaacgcgctgatcggc
aacatgatcatcaagctggccgccgatcatctgcccgacggcggacaggttgcactgctt
tccgccaccaccacctcgaccaatcagaacatctggatggaagagatgaacaaggtgatg
ggcaactaccccggcatcgaagtcgtctcgaccgtctatggtgacgacctggcggacaaa
tcctatcgcgaggcgcagggcctcatgcagtcctatcccgacctggacgccatcatcgcg
ccgacatcggtgggcatcgtcgctgcggcgcaggccgtggaagacgccggcaagattggt
caggtcaacgtgaccggccttgggcttccgtcggaaatggctggcgccatcgaaagcggt
gcctccaaaagctttgccatctggaacccgatcgacctgggctattcggcggcgatgatc
gcgcatgcactggcctctgaaacagccaccgccgagccgggcgccgaaatttccatcgga
cgcatgggcacgatcaccctggacgagacgaactctgccgccatggctgacccgttcgtc
tacgacagctcgaacatcgacgagttcaagtcgatcttctga
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