Tropicibacter oceani: QF118_18815
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Entry
QF118_18815 CDS
T09169
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
try
Tropicibacter oceani
Brite
KEGG Orthology (KO) [BR:
try00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
try03032
]
QF118_18815
03036 Chromosome and associated proteins [BR:
try03036
]
QF118_18815
03400 DNA repair and recombination proteins [BR:
try03400
]
QF118_18815
DNA replication proteins [BR:
try03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QF118_18815
Chromosome and associated proteins [BR:
try03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QF118_18815
DNA repair and recombination proteins [BR:
try03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QF118_18815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
PqqD
Motif
Other DBs
NCBI-ProteinID:
WGW03941
LinkDB
All DBs
Position
complement(3916360..3916647)
Genome browser
AA seq
95 aa
AA seq
DB search
MSKPMTKTQLVAALAEKMDSDKKTAGAALDSLIDIITSEVAAGGAVTLPGVGKIYCKERP
ERMVRNPATGEQFKKEADKQVKMTIAKALKDSVNA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccgatgacaaaaacccagctggtcgcagcactggcggaaaagatggacagc
gacaagaagaccgcgggcgcggctctggattcgctcattgacatcatcacctcggaagtt
gccgcaggtggcgccgtgaccctgccgggcgttggcaagatctattgcaaagagcgcccc
gagcgtatggtgcgcaaccccgcgacgggcgagcagttcaagaaggaagccgacaagcag
gtcaagatgaccattgccaaggccctgaaggacagcgtcaacgcctga
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