Treponema vincentii: GWP43_04000
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Entry
GWP43_04000 CDS
T06435
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
trz
Treponema vincentii
Brite
KEGG Orthology (KO) [BR:
trz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trz03032
]
GWP43_04000 (topA)
03400 DNA repair and recombination proteins [BR:
trz03400
]
GWP43_04000 (topA)
Enzymes [BR:
trz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GWP43_04000 (topA)
DNA replication proteins [BR:
trz03032
]
Prokaryotic type
DNA Topoisomerases
GWP43_04000 (topA)
DNA repair and recombination proteins [BR:
trz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GWP43_04000 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QHX42749
UniProt:
A0A6P1Y061
LinkDB
All DBs
Position
complement(858321..860450)
Genome browser
AA seq
709 aa
AA seq
DB search
MAKKTATKTKKTNLIIVESPAKAKTIEKYLGSGYTVKASMGHLIDLPKSRIAIDIEHGFQ
PEYITVRGRAKLLKELQQDAKNAKHVFLASDNDREGEAIAYHLCNAIREKCEEVPINRIV
FNEITPQAIKTAVQNPMDIDEAKVNAQKARRVLDRLVGYNLSPLLWQKVKNGLSAGRVQS
VALRLICEREAEVENFIPEEFWTLEGAFKKGKTAFDAQLALYKGEKPTLKNEREVQAIID
VLNGKEATVTDIKSTQKTIHPKPPFTTSTMQQTAANRLGFTSRKTMQIAQQLYEGIAVGS
SRVGLITYMRTDSVRISDVALAEVRNWIGEQYPAFLPEKPNFYSVGAKAQDAHEGIRPTY
CTYTPDYLKDYLNRDQLRLYTLIWERFVASQMTGAKTETLSYEISAGDAVFRTASTKVTD
KGFYAVLNLLLSKEEKGKALPALKTGDTLTVDSLTPEQHFTQGPARYTDASIVKMLEQKG
IGRPSTYAPIISVLLDRYYVNRSNKQLVPTQLGRIINDLLVANFKDVIDVNFTAGMEQKL
DEIEEHNADWSKIIGSFYTPFIAQVDSVMAHLGSLKGSLDEPTNFTCEKCGKRMMKKLGR
FGFFLACEGFPECRNTKSIPLAKCPRPGCGGDIVSRRAKGRGKEFFGCTNFPKCNFISHF
KPINALCPKCGWFMVEKYDKKNGSYKACVNPDCDYLHSVVEGIEDRDID
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaaaccgcgacaaaaacgaaaaaaacaaacttgattatcgtagaatcgccg
gcaaaagcaaaaacaatcgaaaaatacttaggcagcggctatacggttaaggcatcgatg
gggcacttaatcgatttaccgaagtcccgtatcgcaattgatatagaacacggatttcaa
cccgaatatatcaccgtacgcggccgcgcaaaacttttgaaggaactgcaacaagatgca
aagaacgccaagcacgtctttctcgcaagtgataatgaccgcgaaggggaagctattgcc
tatcatctctgcaatgcgatacgagaaaaatgcgaagaggttccgataaaccgcatcgtc
tttaacgaaatcacgccgcaggcaattaaaactgcggtgcaaaatcctatggatatcgac
gaagcgaaagtcaatgcgcaaaaagcccgccgcgtcctcgaccgacttgtcggctataac
ctttctcccctgctctggcaaaaagtaaagaacggcctttccgcagggcgggtacaatcg
gttgcgctgcgcctcatctgcgaacgggaagcggaggtagaaaattttatccccgaagaa
ttttggacgctggaaggagcctttaaaaaaggaaaaacagccttcgatgcccagctcgcg
ttatataaaggagaaaaaccgacgcttaaaaacgagcgggaagtacaggctatcatcgat
gtattgaatggaaaagaagcaacggttaccgatatcaaaagtacccaaaagaccatccat
cccaaacctccatttacgacctctacaatgcagcaaacggcagcgaatcggctcggcttt
acctcccgtaaaacgatgcagattgcccaacagctatacgaaggtatcgccgtcggctca
agccgcgtcggtttaatcacctatatgcgtaccgactcggtgcgtatctccgatgttgcc
cttgcggaagtgcgcaactggatcggcgagcaatatcccgcttttttaccggaaaaaccc
aatttctacagcgtcggagcaaaagcacaggacgcccacgaaggtatccgccccacgtat
tgtacttatacgcccgactatctgaaagactacctcaaccgcgaccagttgcgcctctat
acacttatctgggagcgctttgttgcaagccagatgaccggcgcaaagaccgaaacgctc
agctatgagatttccgcaggagatgcggtctttagaacggcttctaccaaggtaacggac
aaaggattctacgccgtgctcaatctgctcctttcaaaagaagaaaaaggcaaggcgttg
ccggccttaaaaaccggcgataccctgacggtagacagcctgactcccgaacagcacttt
acgcaggggcccgcccgctataccgacgcaagtatcgttaagatgctggaacaaaaaggc
atcggacgcccctcgacgtatgcaccgattatttcggtactgctcgaccgctactacgtc
aaccgctccaataagcagcttgttcctacccagctcggtagaataatcaatgatctgcta
gtcgcaaacttcaaagatgtgatcgacgtcaattttaccgccggtatggaacaaaaactg
gacgaaatagaagaacacaatgccgactggtcaaagattatcggctccttttataccccg
tttatcgcgcaggtggattcggtgatggcgcatttaggcagtttgaaaggcagcctcgat
gagccgacaaactttacatgcgaaaaatgcggcaaaagaatgatgaaaaagctcggccgc
ttcggctttttcttggcctgcgagggtttccccgaatgccgcaataccaaatccatccca
ttggctaaatgcccgcgtcccggctgcggcggagacatcgtatcccggcgggcaaaagga
cgaggcaaagaatttttcggttgcaccaactttccgaagtgtaactttatctctcatttt
aagcctatcaacgcactatgtcccaaatgcggctggttcatggttgaaaaatacgataaa
aagaacggaagctataaagcctgtgtaaaccctgactgcgattacctgcacagcgttgtc
gaaggcatcgaagaccgggatatcgactag
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