Terriglobus saanensis: AciPR4_0388
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Entry
AciPR4_0388 CDS
T01408
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tsa
Terriglobus saanensis
Pathway
tsa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tsa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AciPR4_0388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsa03021
]
AciPR4_0388
03400 DNA repair and recombination proteins [BR:
tsa03400
]
AciPR4_0388
Enzymes [BR:
tsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AciPR4_0388
Transcription machinery [BR:
tsa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AciPR4_0388
DNA repair and recombination proteins [BR:
tsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AciPR4_0388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RnfC_N
SDA1_dom
DZR
Vmethyltransf_C
Motif
Other DBs
NCBI-ProteinID:
ADV81223
UniProt:
E8V290
LinkDB
All DBs
Position
453782..458254
Genome browser
AA seq
1490 aa
AA seq
DB search
MSSETRAIRSRLDFSKIPTAIQIPNLIEVQRRSYERFLQMDKLPQEREDNGLQSVFTSVF
PITDFRNVSELEFVDYSIGNWECKCGYLKGLNHLRTACTSCGHMVITDPFHPGDVLCNFC
GTYNKNTPDFCTKCGDPVGLQLKYDQGECEERGMTYSAPLKVTIRLKIYDKDPETGVKTL
RDMKEQEVFFGDIPLMSQNGTFIVNGTERVIVSQLHRSPGVFFETANNRSYFLGKIIPYR
GSWVEFEYDQKNTLYVRIDRKRKFLGTIFLRALGLRTDEEILKTFYTVDNINVRDQKLFW
SVKPEGATNLLGVKPGESVSVNGDEVAPTARKISASTLHKLRGGSVNEVSVENTEFDGAI
FAADVVDLTTGELLYEANQEATTDKLHKITQSGCTNFEIFFPDRDDVGNIITNTLKRDSV
RKPEEALIEIYRKLRPGDPPTLDTATALFEGMFFDPRKYDFSRVGRLKFNIKLYESQDAT
NLDKRTLTPEDFYGTIRYLLKLRKNIGLVDDIDHLGNRRVRAVGELMENQFRIGLVRMER
AIKEKMSVYQEMSTAMPHDLINAKPVMAAIREFFGSSQLSQFMDQTNPLSEITHKRRLSA
LGPGGLSRERAGFEVRDVHPTHYGRICPIETPEGPNIGLISSLSCFARINEYGFIESPYR
RVKGSQVIDYVAVTNAGESGLRQGDPLEVAEAIKLKKQLKKDGKRVLETEPFSFYLSAWE
EDRHTIAQANVELDAEANIKDDLVIARRQGNFILVPKGEVDYVDVSPKQLVSVAASLVPF
LEHDDANRALMGANMQRQSVPLLVAEAPFVGTGMEGVTARDSGAVILARRNGIVDSVDSE
RIIVRVEGEHHPTQLSREVGSDIYQLTKFKRSNQNTCINQKPIVRKGDRVLKGEVIADGP
CTEQGELGLGRNVLVAFMPWRGYNFEDAILISEKLVREDYYTSIHIEEFEIEARDTKLGP
EEITRDIPNVSEHALRDLDESGIIRIGAKISHNDILVGKVTPKGETQLTPEEKLLRAIFG
EKAGDVRDASLTCPPGIEGTVVDVRIFSRKGQEKDERAKAIETEQIEKLERNLADEIRIL
TDERLKRLEGILGAKEVQADLHDERTNKKLLSKGDLLDRDTIELISTRNLKRIRYADKDP
RVNEQIDEIEEMTSRQIDVLRKITNDKIGKLQKGDELSPGVIKMVKVYIAMKRKLSVGDK
MAGRHGNKGVIARILPEEDMPYLPDGTPVEIVLNPLGVPSRMNVGQILETHLGWAAFELG
KKVAELAAQSQKANEIREIFSEAFKNTAALNQLLELDDTQTIRVAAGMKRGIWFGTAVFD
GASEHEIKALLLAAGLPSSGKTELFDGMTGDVFEQPATVGYIYMLKLSHLVDDKIHARSI
GPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYILQELLTSKSDDVFGRTKIYEAI
VKGEAAIEPGVPESFNVLIRELQSLCLDVELVKQADLKKTPALPAVAAAD
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaaacgcgcgccatccgcagccgtctcgatttttcgaagatcccaactgcc
attcagatccccaatctcatcgaggtacagcgccgttcgtatgagcgcttcctgcagatg
gataagctcccccaagagcgcgaggacaatggtctgcagtctgtgttcacctctgttttc
cccattaccgacttccgaaacgtttcggagctcgagtttgtcgattactccatcggcaac
tgggagtgcaagtgcggctatctgaagggtctcaatcatctccgtaccgcctgcacctcg
tgcggacacatggtcatcacggacccgttccatcccggcgatgtgctttgtaacttctgc
ggaacgtacaacaagaacacgcctgacttctgcaccaagtgcggagatcccgtcggcctg
cagctgaagtacgaccagggcgagtgcgaagagcgtggcatgacctactctgcgcccctc
aaggtcacgatccgtctgaagatctacgacaaggaccctgagaccggcgtcaagaccctg
cgcgacatgaaggagcaggaagtcttcttcggcgatatcccgctcatgtcccagaacggt
acgttcatcgtcaacggtaccgagcgcgtgatcgtttcacagcttcaccgttcgccgggc
gtctttttcgagaccgcgaacaaccgcagctacttcctcggcaagatcattccttaccgt
ggcagctgggtcgagttcgaatacgaccagaagaacaccctgtatgtccgcatcgatcgc
aagcgcaagttcctcggaaccatcttcctgcgcgcgctcggtctgcgtaccgatgaagag
atcctcaagaccttctacacggtggacaacatcaatgtgcgcgaccagaagctcttctgg
tccgtcaagcctgagggcgcaaccaacctgcttggcgtaaagcccggcgagtcggtcagc
gtgaacggcgatgaagtcgcaccgacggcacgcaagatctcggcttccacgctgcataag
ctgcgtggcggaagcgtcaacgaagtctcggtggagaacaccgagttcgacggcgcgatc
tttgccgcggacgttgtggacctcaccaccggcgagcttctgtacgaagccaaccaggaa
gccacgaccgacaagctgcacaagatcacccagtccggctgcaccaacttcgagatcttc
ttccccgaccgcgacgacgtcggcaatatcatcacgaataccctcaagcgcgactccgtg
cgtaagcctgaggaagctctcatcgagatctaccgcaagctgcgtccgggcgacccgcca
accctggataccgcaacggccctctttgaaggcatgttcttcgacccgcgcaagtatgac
ttctcgcgcgttggccgtctcaagttcaacatcaagctctacgagagccaggatgctacg
aacctcgacaagcgcacgctgacccccgaggacttctacggcacgatccgctacctgctc
aagctgcgtaagaacatcggcctcgtcgacgatatcgatcatctcggcaaccgtcgcgtt
cgcgctgtcggtgagttgatggagaaccagttccgcatcggtctcgtccgtatggagcgc
gccatcaaggaaaagatgagcgtgtaccaggagatgtcgacggcgatgccgcacgatctc
atcaacgcgaagccggtgatggcggcgatccgcgagtttttcggatcctcgcagctctcg
cagttcatggatcagactaatcctctctcggagatcacgcataagcgtcgtctctccgcg
cttggacctggcggtctgtcgcgtgaacgcgccggcttcgaagtacgtgacgttcatccg
acgcactacggccgtatctgcccgattgagacgcctgaaggtccgaacatcggtcttatc
tcttcgctctcctgcttcgcccgcatcaacgagtacggcttcatcgagtcgccgtaccgc
cgcgtgaagggttcgcaggtcatcgactacgtcgccgttaccaacgccggtgagtcggga
ctgcgccagggcgatccgctcgaagtcgcagaggcgatcaagctgaagaagcagctcaag
aaggacggcaagcgcgtccttgagaccgagcccttctccttctacctctcggcatgggaa
gaagatcgtcacacgatcgcacaggccaacgtcgaactcgacgcagaagccaacatcaag
gatgacctcgtcatcgcgcgtcgccagggtaacttcattctcgtccccaagggcgaagtg
gattacgttgacgtctcgccgaagcagcttgtttccgtagccgcatcgctcgttccgttc
ctcgagcacgacgatgcgaaccgcgctctcatgggtgcaaacatgcagcgccagtccgtt
cctctccttgtcgcggaagcgccgttcgtcggcaccggcatggaaggcgtcacggcgcgt
gactccggagccgtcatcctcgcacgccgtaacggcatcgtggattcggtcgattcggag
cgcatcatcgttcgcgtcgaaggcgagcatcaccccacgcagctttcgcgtgaggttggt
tcggacatctaccagctcacgaagttcaagcgctccaaccagaacacctgcatcaatcag
aagccgatcgttcgcaagggcgaccgcgttctgaagggtgaggtgatcgcggacggaccc
tgcacggagcagggagagcttggccttggacgtaacgtcctggtcgccttcatgccctgg
cgcggttacaacttcgaagatgcgatcctgatctcggaaaagctggtccgcgaggactat
tacacctcgattcatatcgaggagttcgagatcgaagcgcgcgacacgaagcttggaccg
gaagagatcacgcgcgatattcccaatgtctccgagcacgctctgcgtgatctggacgag
tcgggaatcattcgcatcggtgcgaagatcagccacaacgacatcctcgtcggcaaggta
acgccgaagggtgaaacgcagctcacgccggaagagaagctcctccgcgcgatcttcggc
gaaaaggccggcgatgtgcgcgatgcttccctgacctgccctcccggaatcgaaggcacg
gtcgttgacgtccgcatcttctcccgcaagggacaggagaaggacgagcgcgccaaggcg
atcgagaccgagcagatcgagaagctggagcgcaacctggctgacgagatccgtattttg
accgacgagcgcctcaagcgtctcgaaggcatcctcggagccaaggaagttcaggccgat
ctccacgacgagcgcaccaacaagaagctgctctcgaagggcgatcttctcgaccgcgac
acgatcgaactcatcagcacgcgtaacctgaagcgtattcgctacgccgacaaggatccg
cgcgtcaacgagcagatcgacgaaatcgaagagatgacctcgcgtcagatcgacgttctt
cgcaagatcaccaacgacaagatcggcaagctgcagaagggcgatgagctttcgcccggc
gtcatcaagatggtgaaggtatacatcgcgatgaagcgcaagctgtctgtcggtgacaag
atggccggacgccacggaaacaagggcgtgatcgcgcgcatcctgcccgaagaggacatg
ccgtatctgcccgacggcacccccgttgagatcgttctcaatccgctcggcgttccttct
cgtatgaacgtcggacagatcctggagacgcatcttggctgggcagcgttcgaactcggt
aaaaaggttgccgaactcgcagcgcagagccagaaggccaacgagatccgcgagatcttc
tcggaggcgttcaagaacaccgcagctctcaaccagctcctcgagctcgacgacacgcag
accatccgcgtcgccgctggcatgaagcgtggcatctggttcggtacggcggtcttcgac
ggcgcaagcgagcacgagatcaaggcgcttcttctggctgcaggtcttccgtcctcgggt
aagacagagttgtttgatggtatgaccggcgatgtcttcgaacagcccgccacggtcgga
tacatctacatgctgaagctgtctcatctggtcgacgacaagatccacgctcgttccatc
ggaccgtactccctcatcacccagcagccgctgggaggtaaggcccagttcggcggacag
cgcttcggagagatggaagtgtgggcgctcgaagcatacggcgcggcatacattctccag
gagctgctcacctccaagtccgacgatgtctttggtcgtaccaagatctacgaagccatc
gtcaagggcgaggcggcgatcgaacccggcgtgcccgagtcgttcaacgttctcatccgc
gaactgcagtcgctctgcctcgacgtggaactcgtcaagcaggccgatctgaaaaagacg
ccggcgcttcctgccgtcgccgcggccgattag
DBGET
integrated database retrieval system
