Terriglobus saanensis: AciPR4_0775
Help
Entry
AciPR4_0775 CDS
T01408
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tsa
Terriglobus saanensis
Pathway
tsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AciPR4_0775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsa03019
]
AciPR4_0775
Enzymes [BR:
tsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AciPR4_0775
Messenger RNA biogenesis [BR:
tsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AciPR4_0775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Beta-prop_EMC1_N
Motif
Other DBs
NCBI-ProteinID:
ADV81608
UniProt:
E8V6E3
LinkDB
All DBs
Position
922134..923639
Genome browser
AA seq
501 aa
AA seq
DB search
MNPVFEGTTEPTAEPKAVEVKTTTPPVATEVQFNDFNISEKLKQRLAANNFVNPTPVQAK
AIPPALEGRDVLATAATGTGKTLSFLIPMIERMDANPLAALVQQVAQEQAPQPPQYGRQR
GGRNNPPPRGPRAPIRALILLPTRELAMQVLDAYAKIVPNAKQDSVLVCGGLSEGAQLDA
LRRGPRLVVATPGRLEDYLKRREINLNNVEMLVLDEVDRMLDMGFLPAIRRIVGALPKTR
QTMCYSATLDANITEIVRDYVSNPIRIQIGTTSKPNERVELRAFTVMQDQKLSLLDQLLG
EHAGSYLVFSRTKHGADRIAKKLEKLGHETDVIHGDRSQSQRTAALKSFAMGRSRVLVAT
DVAARGIDIQHIAHVVNYDLPNGSDDFVHRIGRTGRASASGVATTFVMPQERSDARKLER
ELKISFKWAEADKGLAKEERNKPVDMNGDMLHMETRAWRTNPSGTGHEPTSVPSRRPQGN
RGPGGPSRRPSSGGGAGRRGR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
ttgaatccagtttttgaaggcaccactgagccgacggcagagcccaaggcagttgaagta
aagaccaccactcctcccgtagcgaccgaagttcaattcaacgatttcaatatttcagag
aagctgaagcagcgtcttgctgccaacaactttgtgaatccgacgccggtgcaggcgaag
gccatccctccggcgctggaaggccgcgatgttctggcgactgcagcaaccggaacgggc
aagaccctttctttcctgatcccgatgatcgagcggatggatgcgaatcctctggcggcg
ttggtacagcaggttgcgcaggagcaggcgccccagcctccccagtacggccgtcagcgc
ggtggacgcaacaatcctcctccccgtggaccccgcgcaccgattcgcgctttgatcctt
ctgcctacgcgtgagcttgcgatgcaggttctcgatgcgtacgcgaagatcgttccgaat
gccaagcaggattccgtgctcgtctgcggtggtctgagcgaaggcgcacagttggatgct
ctccgtcgcggaccgcgtctcgttgtcgcgactcccggccgtcttgaggattacctcaag
cgtcgcgagatcaacctgaacaacgtcgagatgctcgtcctggacgaagtcgaccgcatg
ctggacatgggcttcctgcccgcgatccgccgcattgtgggcgctcttccgaagacgcgt
cagacgatgtgctactcggctacgctcgatgccaacatcacggagatcgttcgcgactac
gtttcgaacccgatccgtatccagattggaactacgtcgaagccgaacgagcgtgtggaa
ctgcgcgctttcacagtcatgcaggaccagaagctgagcctgctggatcagcttctcggt
gagcacgctggatcgtacctggtcttttcgcgcacgaagcatggcgcggatcgtattgcc
aagaagctcgagaagctgggacatgagaccgacgtcatccatggcgatcgttcgcagtca
cagcgtaccgctgctctgaagagctttgcaatgggtcgcagccgcgtcctggtggcgacg
gacgttgccgctcgcggtatcgacattcagcacatcgcgcacgtcgtgaactacgacctg
ccgaacggatcggatgacttcgtgcatcgcattggccgtactggccgcgcgagtgcgtcg
ggtgttgcgaccacgtttgtcatgccacaggagcgcagcgatgcacgtaagctggagcgc
gaactgaagatcagcttcaagtgggcggaagccgacaagggactggccaaggaagagcgc
aacaagcccgtggacatgaacggcgacatgctgcacatggagacacgcgcatggcgcacc
aatccttcgggaacgggacacgagccgacttcggttccgtcacgtcgtccgcaagggaac
cgcggtccgggtggaccaagccgtcgcccgagcagcggtggtggtgctggtcgtcgcggg
cgctag
DBGET
integrated database retrieval system
