Terriglobus saanensis: AciPR4_2139
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Entry
AciPR4_2139 CDS
T01408
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
tsa
Terriglobus saanensis
Brite
KEGG Orthology (KO) [BR:
tsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsa03019
]
AciPR4_2139
Enzymes [BR:
tsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AciPR4_2139
Messenger RNA biogenesis [BR:
tsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AciPR4_2139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
Flavi_DEAD
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADV82941
UniProt:
E8V8G2
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All DBs
Position
2585546..2587942
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AA seq
798 aa
AA seq
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MTATKCRVPIVLVSRKPILPVDAILPEISASLQRTPNLVLEAPPGAGKTTRVPPALLDLV
SGEVLVLEPRRIAARLAARRVAWELGEEVGGLVGYQVRFEEKIGPRTRLRFMTEGILTRR
LLSDPTLKGVDAVVLDEFHERHLDSDLALALLKHLQRARPEIRIVVMSATLDAAPIARYL
GDCPVLRSEGRLFALSIRNMPYSSDSLSIQVRRALELLNKEHHTGNILAFLPGSAEIRRT
MRECEGVVRQTGLLVLPLHGDLSPAEQDRAVLPTTERKLIVATNVAESSVTVEGVTAVID
SGLARFAMYSPWTGMPTLQIGRVSKASATQRAGRAGRTGPGQVLRLYPEEDYFLRPEHDA
PEIARADLSQLLLNLRAMKIAHIGDLDWLDAPPADAVQSAELLLDRIGATGGVEQRMVRY
PLPPRLARILVEALNRGVGEDGCRAAALLGLGERSTKNDLLETMDLPQEHRARQHTEQLL
RMARPPKQIGEDDEALLLSVLSGFPDRVARRRTGNQIMLSTGVSAEVAGERPHSEFMVAL
DAENRKENPLPLVRMTARIEPEWLLDLFPDRVEERSSVVWNRTGERVERVSALLYDKLVI
QESRGAASEIEAANLLAEKALEVGIDRFVEKEILESFLSRLAFAGIASPDIPQALRELCL
GLQSFGELREAAKNLMPLLQQKLDGRLLDEIAPLSIRLKTGKPTKVHYEQGKSPWISSRL
QDFFGMRDTPRIGPDQTPLVVHLLAPNNRAVQTTADLAGFWERLYPKVRRELMQRYPKHA
WPESPGPKKDKIRTNVEL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
ttgactgcgacgaagtgccgtgttccgattgtcctagtgagtcgaaagcccattcttccg
gtggatgcgattctgccggagatttctgcctccttgcagcggacgcccaaccttgtcctc
gaagctcccccgggagccggaaagaccacccgcgttccaccggccctcctcgatctcgtc
tccggcgaagtcctcgtgctcgaacccagacggatcgccgctcgtctggcggcacgaaga
gttgcatgggaactaggtgaagaagttggcggcttagtcggctaccaggtgcgttttgaa
gaaaagatcgggccgcgcacacgtctgcggtttatgacggaaggcattctgacgcggcgg
ctcctgagcgatcccacgctgaagggggtggatgcggtcgttctcgacgaatttcacgaa
cgccacctggatagcgatctggcgctggcgcttttgaagcatctccagcgtgcacgaccg
gaaattcgcatcgtcgtaatgtcagctacgctcgatgcggcgccgattgctcgatacctg
ggagactgccctgttcttcggtccgaaggaaggctctttgcactgtcaatcagaaatatg
ccgtactcgtccgattccctttcgattcaggtaagacgcgcgctcgaattgctgaacaaa
gagcaccacaccggcaacattctcgccttcctgcctggatccgccgagatccggcggacc
atgcgcgaatgcgaaggcgttgtgcgccagaccggtttactcgtccttccgctgcatgga
gacctgtcgcctgcagagcaggatcgcgcggtgttgcctacgactgaaagaaagctgatc
gtagccacgaacgttgcggaaagctccgtcactgttgaaggtgtgacggccgtcatcgac
agcggtctggctcgcttcgcgatgtactccccttggaccggcatgcctacgctgcagatc
gggcgcgtcagcaaagcctccgcaacacaaagagccggacgagccggacgcaccggtccc
ggtcaggtcctccggctttatcccgaagaagactattttctgcgacccgaacacgacgcc
cccgagattgcgcgcgccgatctttcgcagctcttgctcaacctccgcgccatgaagatc
gcccatatcggcgacctcgattggctggatgcgccacctgcggatgcggtgcagagtgct
gaactcctactcgatcgaatcggtgcgacaggcggtgtggagcaacgcatggtgcgatat
cccctgcctcctcgcctggcgcgcatcctcgtggaagctttgaaccgcggcgttggagaa
gatggatgccgtgccgcggcgttgcttggcctgggagaacgcagcaccaagaacgatctg
ctggaaacaatggacctgccacaggagcatcgcgcccggcagcatacggaacagctcctc
aggatggcgcgccccccgaaacaaattggcgaagatgacgaggcgcttctgctcagcgtt
ctgtctggctttccggatcgcgtcgcccgtcggcggacgggcaatcagattatgctttcc
acgggggtctccgccgaggtggcgggcgagcgtccgcactctgagttcatggtcgcgctc
gacgcggagaatcgcaaagagaaccctctgccactcgtccgaatgacggcgcggatcgag
ccggagtggctacttgacctcttccccgatcgcgtcgaagagaggtcaagcgtggtctgg
aatcgaacaggagagcgcgtcgaaagagtcagcgccctgctttacgacaagcttgtgatt
caggagtcccgaggcgctgcctccgagatcgaagctgccaacttgctcgcagaaaaggcg
ctggaggttgggatcgatcgtttcgtagagaaagagattctggagtctttcctctcgcgg
ctggccttcgcaggaatcgcatcaccggatattccgcaggcgctgcgtgagctctgcctg
ggtcttcagagttttggcgaacttagagaagcggcaaaaaatctcatgccccttcttcag
cagaagttagacggcagacttctcgacgagatcgctcctctgagcattcgtctcaagaca
ggaaaaccgacgaaggtgcattatgaacagggaaaatcgccctggatctcgtcgcgtctc
caggattttttcggcatgcgggacaccccgcggatcgggccggaccaaacaccacttgtc
gtccatctgctggcgccaaacaatcgagcggtgcaaacaaccgcggatcttgcgggtttt
tgggaacgcctttatcccaaagtacgacgggaattaatgcaacgctatccaaagcatgca
tggccggagagtcccgggccgaagaaagataaaattcggacgaacgtagaattataa
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