Thiothrix subterranea: HMY34_00785
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Entry
HMY34_00785 CDS
T07831
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00260
Glycine, serine and threonine metabolism
tsb00630
Glyoxylate and dicarboxylate metabolism
tsb00670
One carbon pool by folate
tsb00785
Lipoic acid metabolism
tsb01100
Metabolic pathways
tsb01110
Biosynthesis of secondary metabolites
tsb01200
Carbon metabolism
Module
tsb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HMY34_00785 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HMY34_00785 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HMY34_00785 (gcvP)
00670 One carbon pool by folate
HMY34_00785 (gcvP)
Enzymes [BR:
tsb01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
HMY34_00785 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QQZ27405
LinkDB
All DBs
Position
complement(166170..169121)
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AA seq
983 aa
AA seq
DB search
MTTLYELEQHDDFIARHIGPNAADTAAMLQTVGAESLDALIDSTVPASIRLPAPLAIDGS
RSEAETLAYLKQLARQNVVAKSYIGMGYYDTVVPPVILRNVLENPGWYTAYTPYQPEISQ
GRLEGLLNYQQMVTDLTGMDIANASLLDEATAAAEAMTLCKRSNKLKSDKFFVGADVHPQ
TIDVLKTRAEHFGFELVIGNPYSELAGQEVFGVLLQYPSTTGEVVDIEALIKQAHAQKAL
VCVASDLMALVMLKAPGDMGADVVVGNSQRFGVPMGFGGPHAAFFAVKDAFKRTMPGRVI
GVSIDSHGKQALRMAMQTREQHIRREKATSNICTAQALLANMAGFYAVYHGAAGLKTIAG
RIHRLTNILAKGLQQKGVQLLNDTWFDTVTVNLGGQSGDIQQRAVNAGVNLRWGNDGQDN
GDGDGVVETQNFASLRVGVGVGVGISIDERKTRADIAELFDVLLGAGHGLDVDALDAAVV
AEGFSGIPSGYQRTSEFLTHPVFNSHHSESEMLRYLKRLENKDFSLAHGMIPLGSCTMKL
NATTEMIPVTWNEFANIHPFAPQEQTVGYRAMIKELEDWLVEITGYDAISMQPNSGAQGE
YAGLVAIRRYQASIGQGHRDVCLIPSSAHGTNPASAAMVSLKVVVVECDANGNVDVADLR
AKAEKHAANLSCLMVTYPSTHGVFEQDIVEICDIVHQFGGQVYMDGANMNAQVGLSKPGK
MGSDVSHLNLHKTFAIPHGGGGPGMGPIGVKAHLAPFLSSHAVTPPDGIALGNSAVSAAP
YGSGAILPISWAYIKLMGAAGLQRATEMAILNANYIMQRLAEHYPVLFRGANGRVAHECI
IDIRPLKAASGVDESDIAKRLMDYGFHAPTMSFPVAGTLMIEPTESEPKEELDRFCDAMI
AIREEIRKVQEGVWPADNNPLVNAPHTLDDLVNAWERPYSQTEAVFPQGVSPTAKYWPTV
NRIDNVYGDRNLVCSCPSVDSYR
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgacaactttgtacgaacttgaacaacacgacgattttattgcccgccacattggcccc
aacgcggcggatactgcggcaatgctgcaaaccgtgggtgcggaatcgctggatgcgctg
attgacagcactgtgcctgcgagcattcgcctgccagcaccgttggcaattgacggcagc
cgttccgaagccgaaacgctggcgtatctgaagcaactggcgcggcaaaatgttgttgcc
aagtcgtacatcggcatgggctattacgatacggtcgtgccgccggttattttgcgtaat
gtgctggaaaaccccggttggtacaccgcgtatacgccgtaccagccggaaatttcccaa
gggcggctggaaggcttgctcaattaccagcaaatggtcacggatttgacgggcatggac
attgccaatgcctcgttgttggatgaagcgacggcggcagcggaagcaatgacgctgtgc
aagcgttccaacaagctcaaatcggataaattttttgtgggtgcggacgtgcatccgcaa
actatcgacgtgctgaaaacccgtgcggaacacttcggctttgaattggtgatcggcaac
ccgtatagcgagttggcggggcaggaagtgtttggtgtgttgctgcaataccctagcacc
acgggcgaagtcgttgatattgaagcattgatcaagcaggcgcacgcgcaaaaagcgttg
gtgtgcgtggcttctgatttaatggcgttggtgatgttgaaagcaccaggggacatgggc
gcggatgtggtggtcggcaactcgcagcgtttcggcgtgccaatgggtttcggtgggcct
catgcggcgttttttgcggtgaaggatgcgttcaagcgcaccatgccggggcgcgtgatc
ggggtttcgattgatagtcatggcaagcaggcgttgcggatggcgatgcagacccgtgag
cagcatattcgtcgtgagaaggcaacttccaatatttgtacggcgcaggcgttgctggcg
aatatggcgggattttatgctgtgtatcatggtgcggcagggctgaagacgattgcgggg
cggattcatcggctgacgaatattctggcgaagggcttgcagcagaagggtgtccaactg
ttgaatgacacttggtttgatacggtgactgtcaatttaggcgggcagtctggagacatt
caacagcgggcagtgaatgccggagtgaacctgcgttggggtaacgatgggcaggataat
ggtgacggtgacggtgttgtagagacgcaaaattttgcgtctctacgggtgggtgttggt
gtcggtgtcgggattagtattgacgagcgcaaaacccgtgcggacattgctgagctgttc
gatgtgctgctgggcgcagggcatgggttggatgtggatgcgctggacgctgcggttgtg
gcagaaggtttcagcgggattccatctggctaccagcggactagcgagtttctgacgcat
ccggtgtttaattcacatcattcggaatcggagatgttgcgttacctcaagcgcttggag
aataaggatttctcgctggcgcatgggatgattccgctgggttcttgcaccatgaagttg
aatgcgaccacggaaatgattccggtgacgtggaacgaatttgccaatattcacccgttt
gcgccgcaggagcagaccgtgggttatcgcgccatgatcaaggaattggaggattggttg
gtggaaatcactggctatgatgcgatttcgatgcagccgaattcgggggcgcagggcgaa
tacgcggggttggtggcgatccgccgctatcaggcgagtattgggcaggggcatcgggat
gtgtgtttgattccgagttcggcgcatggcacgaatccggcttcggcggcgatggtgagc
ctgaaggtggtggtggtcgagtgcgacgcgaacggtaacgtggatgtggcggatttgcgt
gccaaggcggaaaaacacgcggcgaatttgtcgtgcttgatggtgacttatccgtctacg
cacggggtgtttgagcaggacatcgtggaaatttgcgacatcgtgcatcagttcggtggg
caggtgtacatggatggcgcgaacatgaacgcgcaagtgggcttgtcgaaaccgggcaag
atggggtcggatgtgtcgcatttgaacttgcacaagacctttgcgattccgcacggcggc
ggtggccctggcatggggccgattggggtgaaggcgcatttggctccgtttttgtccagc
catgcggtgactccgccggatgggattgcgctggggaatagtgcggtgtcggcagcacct
tatgggagtggggcgatcctgccgatttcgtgggcgtacatcaagttgatgggggcggcg
gggttgcagcgggcgacggagatggcgattttgaacgccaattacatcatgcaacgcttg
gctgagcattatccggtgctgttccggggggcgaatgggcgggtggcgcatgagtgcatt
atcgacattcgtccgttgaaggcggcttcgggggttgatgagtcggacatcgctaaacgc
ttgatggattacggtttccacgcgcctaccatgtcgtttccggtggcggggacgctgatg
attgagccgaccgaatccgagccgaaagaggagcttgaccgtttttgcgatgcgatgatt
gcgattcgggaagagattcgcaaggtgcaggagggcgtgtggcctgcggacaataatccg
ctggtgaatgcgccgcatacgctggatgatttggtgaatgcttgggaacgcccttacagc
cagaccgaggcggtgttcccgcagggtgtcagcccgacggcgaagtattggcctaccgtg
aaccggattgataatgtgtatggggatcggaatttggtgtgttcttgtccgagtgtggat
agttaccgttaa
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