Thiothrix subterranea: HMY34_01230
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Entry
HMY34_01230 CDS
T07831
Name
(GenBank) H-NS histone family protein
KO
K03746
DNA-binding protein H-NS
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsb03036
]
HMY34_01230
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_01230
Chromosome and associated proteins [BR:
tsb03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
HMY34_01230
DNA repair and recombination proteins [BR:
tsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMY34_01230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
Histone_HNS_N
DUF3201
Clr5
Motif
Other DBs
NCBI-ProteinID:
QQZ27489
LinkDB
All DBs
Position
268473..268802
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AA seq
109 aa
AA seq
DB search
MSNVDISNLSVAELEKLKGSIDSAIANRRDGELLSLREAIEDMVERSGFTLEEVIEIMQA
RPVKKRIVKAKYSNPNNPEQTWSGRGRKPGWVEEWISTGHDLNDCLIPE
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgttgatatttccaatctcagtgttgcggaacttgaaaaactcaaaggcagt
attgatagtgcgattgccaatcgccgtgacggtgaattgttaagtttacgcgaagcgatt
gaagacatggttgagcgttcaggctttacccttgaagaagtcatagaaatcatgcaagcg
cgtcctgtgaaaaaacgtattgttaaagcaaaatacagcaaccctaataatcctgaacaa
acgtggagcggtcgcggtagaaagccaggttgggttgaagaatggatttctaccggtcat
gacttaaatgattgcttgattcctgaataa
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