Thiothrix subterranea: HMY34_01715
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Entry
HMY34_01715 CDS
T07831
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_01715
Enzymes [BR:
tsb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HMY34_01715
DNA repair and recombination proteins [BR:
tsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HMY34_01715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF5848
Motif
Other DBs
NCBI-ProteinID:
QQZ27573
LinkDB
All DBs
Position
352581..354113
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AA seq
510 aa
AA seq
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MRKLCLIFGDQLDRASPLFKDFDPQQDYLWMAEVAQEATHVWSHKQRIALFFAAMRHFAA
ELTVKQYPLHYQQLDQHHATSLGEALALTLQTTSPAEVWLVRPGDYRVLLEIVATCKHYN
TPLKLLSDTHFLSTPGEFRRWAGERKQLRMEYWYRELRKRYNILLEDGKQPIGGNWNYDS
DNRKSFPKSGPTAVPTPPNFAADTITQAVIRLVNARFPDHPGTLDSLQWPVTPVQAQQAL
TRFLDQALPQFGDFQDAMWQNQPFLNHSLLASSLNLKLLNPLEVIRQAEARYWQHRASLA
AVEGFIRQILGWREYVRGLYWLHMPDWYEWNALDAQRNLPAFYWTGDTEMNCLRESIGQT
LQHGYAHHIQRLMVTGLFAQLYGVKPIKVHEWYLAVYVDAVEWVELPNTLGMSQYADGGR
MASKPYIASGKYIQKMSNYCQHCRFNPAKSVGQDACPFTTLFWDFLDRYEARFAAHPRMG
FMVSNLRKLSATERDAIRAQAHHFHQQHST
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaattgtgcctgattttcggcgaccaactcgatcgcgcctcaccgctgttcaaa
gacttcgacccgcaacaagattacctgtggatggcggaagtcgcccaagaagccacgcac
gtctggtcacacaagcaacgcattgcgctgttttttgctgccatgcgccatttcgcggcc
gaactcaccgtcaagcaataccccttgcactaccagcaactcgatcagcaccacgccacc
agtttaggcgaagcactggcactgaccctgcaaaccacttcgcccgccgaagtgtggctg
gtacgccccggcgattaccgcgtcttgctggaaattgtcgccacctgcaagcactacaac
accccgctgaaactgctcagcgacacccatttcctctccactcccggcgaattccgccgc
tgggcaggcgaacgcaagcaattacgcatggaatattggtatcgggaattgcgcaaacgc
tacaatattctgctcgaagacggcaagcagcccatcggtggcaactggaattacgacagc
gacaaccgcaaatcctttcccaaatccggcccgactgccgtgcctacgcccccgaacttc
gccgccgacacgattacgcaagcagtcattcggctagtgaatgcgcgttttcccgatcac
cccggcacactggatagcctgcaatggccggtcactcccgtacaagcgcaacaagcgctt
acccgttttcttgatcaagccctgccccaattcggcgattttcaagatgccatgtggcaa
aatcagcccttcctcaaccattctttgcttgccagcagtctcaacctcaagttgctgaat
ccgctggaggttatccgccaagccgaagcacgttactggcaacaccgcgcctccttagcc
gccgttgaaggtttcatccgccaaattctcggctggcgcgaatacgtgcgcggtttgtat
tggctgcacatgcccgactggtacgaatggaacgcgctcgatgcgcaacgcaatttgccc
gcgttttactggacgggcgataccgagatgaattgcctgcgggagagtattgggcaaacc
ttgcaacacggttacgcgcaccacatccaacgcctgatggtgacggggctatttgcgcag
ctttacggcgtgaaacccatcaaagtacacgaatggtatctcgccgtttacgtcgatgcg
gtcgaatgggtggaattgcccaacacgctgggcatgagccaatacgcggatggtgggcgc
atggcgtccaaaccgtacattgccagcggcaaatacatccaaaaaatgagcaattactgc
cagcattgccgtttcaaccctgccaaatcggtagggcaagatgcctgcccattcactacg
ctgttttgggattttctggatcggtacgaagcgcggtttgccgcacacccgcgcatgggg
tttatggtaagcaacttgcgtaaattatccgccactgagcgtgacgcgattcgagcgcaa
gcccaccactttcatcaacagcattcaacctga
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