Thiothrix subterranea: HMY34_02275
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Entry
HMY34_02275 CDS
T07831
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
tsb
Thiothrix subterranea
Pathway
tsb02010
ABC transporters
tsb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMY34_02275
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMY34_02275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsb02000
]
HMY34_02275
Transporters [BR:
tsb02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
HMY34_02275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
BCA_ABC_TP_C
AAA_22
SMC_N
AAA_30
AAA_29
T2SSE
AAA_15
AAA_28
AAA_19
Mg_chelatase
AAA_23
AAA_16
SRP54
TsaE
AAA_27
AAA_24
NACHT
RsgA_GTPase
AAA_7
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QQZ27671
LinkDB
All DBs
Position
complement(462864..463577)
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AA seq
237 aa
AA seq
DB search
MSLLSVQNLCVNYDSIRAVKGISFEVEAGETVCLIGANGAGKTTTLKTLSGLLPATSGEI
VFDGRKLHGMPAYQIAALKLALVPEGRGIFTRMSVLENLMMGAYNRSDRAAVQREIDDIY
TLLPRLAERRQQQAGLLSGGEQQMLALARAMLSKPKLLMLDEPSMGLAPIMVQTIYRIIQ
TIAQQGITILLIEQNVRLALSISQRGYVMEHGDITLSGAAQTLANDPAVQAAYLGEL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttatctgtgcaaaatctgtgcgtcaattacgacagcatccgcgcggtaaaa
ggcattagctttgaggttgaagcgggtgaaacggtgtgtttgatcggcgcaaacggtgct
ggtaaaaccaccacgctgaaaaccttgagcggtttattacccgcgacttccggcgaaatc
gtgttcgacgggcgcaagctccatggaatgcccgcctaccaaattgctgcgctgaagctg
gctttagtgccggaaggtcggggtatttttacgcgcatgtccgtgttggaaaacctgatg
atgggcgcgtacaaccgttctgatcgtgccgctgtgcagcgtgaaatcgacgacatttac
accttgttaccgcgtttggcagaacgtcgccaacaacaggcggggctgctttccggcggc
gaacaacaaatgttggcactggcacgcgccatgctgtccaaaccgaaactgctgatgctc
gacgaacccagcatggggcttgcgccgattatggtgcaaaccatttaccgcattattcaa
accattgcgcaacaaggcatcactattttgctgatcgaacaaaacgtgcgcctcgcttta
agcattagccagcgcggttacgtgatggaacacggcgatattaccttgagtggtgcggcg
caaaccttggcaaatgaccctgccgtacaagccgcttatctgggcgaactctaa
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integrated database retrieval system
