Thiothrix subterranea: HMY34_02320
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Entry
HMY34_02320 CDS
T07831
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00020
Citrate cycle (TCA cycle)
tsb00640
Propanoate metabolism
tsb00660
C5-Branched dibasic acid metabolism
tsb00720
Other carbon fixation pathways
tsb01100
Metabolic pathways
tsb01110
Biosynthesis of secondary metabolites
tsb01120
Microbial metabolism in diverse environments
tsb01200
Carbon metabolism
Module
tsb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tsb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HMY34_02320 (sucD)
00640 Propanoate metabolism
HMY34_02320 (sucD)
00660 C5-Branched dibasic acid metabolism
HMY34_02320 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
HMY34_02320 (sucD)
Enzymes [BR:
tsb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HMY34_02320 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QQZ27679
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All DBs
Position
complement(473170..474045)
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AA seq
291 aa
AA seq
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MSVLINKDTKVICQGFTGKQGTFHSEQAIAYGTNMVGGITPGKGGTTHLGLPVFNTVREA
VEATGADASVIYVPAAFCKDSIIEAAYAGIKLIVCITEGVPALDMLEAKVVVDSLGVRLI
GPNCPGIITPGECKIGIMPGHIHKPGSVGIVSRSGTLTYEAVKQTNEWGQSTCIGIGGDP
IPGTSFIDALTLFQADPQTEVILMCGEIGGSAEEEAAEFIKAHVTKPVVSYIAGVTAPKG
KRMGHAGAIIAGGKGTAQEKYAALQQAGVYTVQSPAELGKGVAAAFAALQG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtattgattaataaagacaccaaagtcatctgccaaggtttcaccggcaagcaa
gggactttccattctgagcaagcaattgcttacggtactaacatggtcggcgggatcacg
ccgggtaaaggcggcaccacgcatttgggtttgccagtcttcaatactgtgcgcgaagcg
gtcgaggcaacaggtgcggatgccagcgttatctacgttccggcagcattctgtaaagat
tccatcattgaagcggcttacgcaggcatcaagctgatcgtgtgcattactgaaggcgtt
cctgcactggatatgctggaagcgaaagtggtcgtggacagtttaggcgtgcgtctgatt
ggccccaactgccccggcattattacaccgggcgaatgcaaaatcggcattatgccgggt
cacatccataaaccgggcagtgtcggtatcgtgtcacgttccggcacgctgacttacgaa
gcggttaagcaaaccaacgaatggggtcaaagtacctgtatcggtattggtggcgacccc
attccgggcacaagcttcattgatgcactgaccttgttccaagctgacccgcaaaccgaa
gtcattttgatgtgcggcgaaatcggcggttcagcggaagaagaagcggcggaattcatc
aaagcgcacgtcactaaaccagtggtttcctacattgcaggcgttaccgcacccaagggt
aagcgcatgggtcacgcaggcgcgattattgcaggcggaaaaggcactgcgcaggaaaag
tatgctgcgctgcaacaagctggcgtgtatactgttcagtctccggctgaactagggaag
ggtgtcgccgctgcgttcgcagccctgcaaggataa
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